Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6k9kA_

Fold library idPDB HeaderMoleculeTitle
c6k9kA_7.82PDB header: cell cycleChain: A: PDB Molecule: serine-protein kinase atm;


Added to library: Sat Dec 28 08:55:52 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDLLICCRQLEHDRATERKKEVEKFKRLIRDPETIKHLDRHSDSKQGKYLNWDAVFRFLQKKMQEISSLV
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

TT
S

SSS
SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence KYFIKCANRRAPRLKCQELLNYIMDTVKDGAIYGADCSNILLKDILSVRKYWCEISQQQWLELFSVYFRL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) T
S




GGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence YLKPSQDVHRVLVARIIHAVTKGCCSNSKFLDFFSKAIQCARQEKSSSGLNHILAALTIFLKTLAVNFRI
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTSS
S
SS

S



TTTS



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVCELGDEILPTLLYIWTQHRLNDSLKEVIIELFSTKWRSILYNLYDLLVNEISFRNIAVKENLIELMAD
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) SS


ST




 .........290.........300.........310.........320.........330.........340.........350
Sequence ICHQVFPWLQIATQLISKLSPLLMILSQLLPQQRHGERTPYVLRCLTEVALCQDKRSNLESSQKSDLLKL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)







TTS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence WNKIWCITFRGISSEQIQAENFGLLGAIIQGSLVEVDREFWKLFTGSACRAVCCLTLALTTSVKMGIEQN
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) T
TTS


TTT

SS




S
 .........430.........440.........450.........460.........470.........480.........490
Sequence MCEVNRIMKWLLFYQLEGDFPHLVLEKILVSLTMKNCKAAMNFFQSVPECEHHQKDKEELSFSEVEELFL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T



TTT


TTT
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence QTTFDKMDFFSVHQNLKESLDRCLLGLSEQLLNNYSSEITNSETLVRCSRLLVGVLGCYCYMGVIAEEEA
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) T


TSS

S
S

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence YKSELFQKAKSLMQCAGESITLFKFDRGEVESMEDDTNGNLMEVEDQSSMNLFNDYPGESQSTIGAINPL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) ST

T



TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AEEYLAADIRRKLLMLIDSPTKSLHLHMYLMLLKELPGEEYPLPMEDVLELLKPLSNVCSLYRRDQDVCK
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)



TTTTTS

TTTS
S
SST
 .........710.........720.........730.........740.........750.........760.........770
Sequence TILNHVLHVVKNLGQSNMDSENTRDAQGQFLTVIGAFWHLTKERKYIFSVRMALVNCLKTLLEADPYSKW
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) S

TT
STTT
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence AILNVMGKDFPVNEVFTQFLADNHHQVRMLAAESIGDSSRLLKALPLKLQQTAFENAYLKAQEGMREMSH
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

SSS


S
 .........850.........860.........870.........880.........890.........900.........910
Sequence SAENPETLDEIYNRKSVLLTLIAVVLSCSPICEKQALFALCKSVKENGHLVKKVLEKVSETFGYRRLEDF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) STTT
S
S

TT

S
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence MASHLDYLVLEWLFILLNYTNIEDFYRSCYKVLIPHLVIRSHFDEVKSIANQIQEDWKSLLTDCFPKILV
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) T

SSS
S


SSTTS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NILPYFAYEGTRDSGMAQQRETATPEIVVELLMTLHEPANSSALCDFSGDLDPPPHFPSHVIKATLKSIL
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) S



TS




S








 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EILSKSPDSYQKILLAICEQAAETNNVYKKHRILKIYHLFVSLLLKDIKSGLGGAWAFVLRDVIYTLIHY
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP) TSTTTSSTTTT

S
SSSTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence INQRPSCIMDVSLRSFSLCCDLLSQVCQTAVTYCKDALENHLHVIVGTLIPLVYEQVEVQKQVLDLLKYL
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP)
SS
S

TT


SS



TT

 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence VIDNKDNENLYITIKLLDPFPDHVVFKDLRITQQKIKYSRGPFSLLEEINHFLSVSVYDALPLTRLEGLK
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) SS

TTTT

SSTT


SS

S
S


S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence DLRRQLELHKDQMVDIMRASQDNPQDGIMVKLVVNLLQLSKMAINHTGEKEVLEAVGSCLGEVGPIDFST
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TS
S



TT
TGGG

S


TT
SSS
TTTT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence IAIQHSKDASYTKALKLFEDKELQWTFIMLTYLNNTLVEDCVKVRSAAVTCLKNILATKTGHSFWEIYKM
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S





S




TTTTSSST

SSTTTTT
STTTSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence TTDPMLAYLQPFRTSPLSENHDIWIKTLTCAFLDSGGTKCEILQLLKPMCEVKTDFCQTVLPYLIHDILL
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) SSSSSGGGTSGGG







SSTSSSSS
TS

TT

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence QDTNESWRNLLSTHVQGFFTSCLRHFSQTSRSTTPANLDSESEHFFRCCLDKKSQRTMLAVVDYMRRQKR
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
SS

SSSTTTTTTTSS


SSTTTTSSS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence PSSGTIFNDAFWLDLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSLAETGISLQDLLLEIYR
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

S
S


SSTTT


TTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence SIGEPDSLYGCSYHESLYNALQSLRDREFSTFYESLKYARVKEVEEMCKRSLESVYSLYPTLSRLQAIGE
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)

T



TS
SS
TTS
TT

S

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence LESIGELFSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMALRTVILEILMEKEMDNSQRECIKDIL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TT


SS
TTS

S

SSS
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence TKHLVELSILARTFKNTQLPERAIFQIKQYNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDA
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) T
SSTGGGS
SS

TGGGTTTSS

SSSTT
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence SCAANNPSLKLTYTECLRVCGNWLAETCLENPAVIMQTYLEKAVEVAGNYDGESSDELRNGKMKAFLSLA
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TGGGG

S
T

S
TT
SSSSTTT
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence RFSDTQYQRIENYMKSSEFENKQALLKRAKERYTVKVQRELELDELALRALKEDRKRFLCKAVENYINCL
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) TT



TTT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence LSGEEHDMWVFRLCSLWLENSGVSEVNGMMKRDGMKIPTYKFLPLMYQLAARMGTKMMGGLGFHEVLNNL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
SS
TTTS
T



TTSS


SSST
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence ISRISMDHPHHTLFIILALANANRDEFDEDRTEAANRIICTIRSRRPQMVRSVEALCDAYIILANLDATQ
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TTSSTTTTTS





TT
TTT
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence WKTQRKGINIPADQPITKLKNLEDVVVPTMEIKVDHTGEYGNLVTIQSFKAEFRLAGGVNLPKIIDCVGS
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT


SSS



TTT
S






SS

SS

S











B
SSSS


T
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence DGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQRNTETRKRKLTICTYKVVPLSQRSGVLEWCTGTVPIG
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TS
SS

GGGT
STT










BTT
SS

S
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence EFLVNNEDGAHKRYRPNDFSAFQCQKKMMEVQKKSFEEKYEVFMDVCQNFQPVFRYFCMEKFLDPAIWFE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TT

SS

S
STTTT



TT
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence KRLAYTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T




TTTB
SSSS


B


S

SGGGGSSSS







 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence MGITGVEGVFRRCCEKTMEVMRNSQETLLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDETEIDQSFNKV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

STTTT
T

TT
TTSS

ST

 .........2460.........2470.........2480.........2490.........2500.
Sequence AERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAIDPKNLSRLFPGWKAWV
Predicted secondary structure




















SS confidence


















































Known secondary structure (DSSP) TTSS

TTSS


SS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D