Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6k31B_

Fold library idPDB HeaderMoleculeTitle
c6k31B_2.60PDB header: lyaseChain: B: PDB Molecule: aipepck;


Added to library: Sat Nov 9 08:24:13 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SANSAIALRLELLGAPVPRLVAPILARQRELTRRLANRPCAADRRIQAFLDSYLDGAAAQPKLPGATLVL
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
T





S

TTTTTTTS




TTTSS





SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DQPGLARALSLPVDATSFTSDYVESYRVLSGVLHNPRNDRRTTAGVFHVAEGGLPIPDDKKAVPRDVFAR
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
STTTS
TT
S
SSTTSS
S


TT
SSSS


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLAAAVDAPDDLXTLPWASTQADPARCFVSLLLRPVVVPEVPGFSAERSXEIRFIAPGGLVSNLDFVEGI
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S

B
GGGTTSSS

B




BTTTB

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGNGGDPYLPENDASLAPESWTGHTGCVILAPHLTRLTKKELGLPAWEEATERQRRDGXCWRGADELYND
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)




TTSGGG
GGGSGGG
GGGGG
BTTTTT

BGGG

TT
SBSSTT
BGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKAFKLVARDERGVIVTIIADNYYGYCKKEVKTQISYSANLFGCVEEEHSGGALAFPRYNLGQEYTDVHT
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) G




TTSS



S
T



 .........360.........370.........380.........390.........400.........410.........420
Sequence PAGATVERVLARNPGRFEARADGSAVLLDDDGRPDEGIVLVPAGAHFSXRTQTVTWDRADGREASIPLLA
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
TT

STTT
TTS

TTSS

TT
TTTT

TTS



T
 .........430.........440.........450.........460.........470.........480.........490
Sequence DRVYIAPGGYRVHAKHREGDATQWHLVGTAPWATQAHKPATVSGGGKSEISKSLLDAFVFGEAYVGDVDA
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T

TTS
TT
S

S

TTS
TGGGGS
GGGG


B
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLDAVQKILDPILSERRSLGSVIKLLTPSSXYTEEYNAFLESIPAHIKELIFTVKRYYQPGWGADWRSHF
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) T

TT
TTS
TS

TTS
S


GGGTT

GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence SVGIINGRKGNSLRLDGEVIKVNXLRVGFEDDGAWRLLSLRPDFSPAAKVQTEDDITSSIVAPGGLESTA
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

TT
SB
TT


TT

B
TTSSS
TTSGGGT
 .........640.........650.........660.........670.........680.........690.........700
Sequence GSSVSRKFVTNCESLLFQRPDDAIVRGYDKQTERDXSGTGLFISNYQPLTPADARAXVADAPGLSRFTEP
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T
SS
S
S

TTTTSTTT
TSSSSB

B
STS
 .........710.........720.........730.........740.........750.........760.........770
Sequence XQELVRRAAAIPEAADPREETYWTSTANPRLVGGAPTRNPRYLQVRPDIANPRDVALADLSIHLYRDAPL
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TS


SSGGG

BB

TT
B
TT
S



T

T
 .........780.........790.........800.........810.........820.........830.........840
Sequence AAPARHGVDVVAAGRRNNPPEPGVPALCAYNPLHYXELPELFXEFISSXTGKSPSTTGAGSEGALTKSPF
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) TS






B

BTTB

B



S

SSS

SSS


GGG
GGG
 .........850.........860.........870.........880.........890.........900.........910
Sequence NALPPVYDLNAALLSYALGGYDGWLSSAGYIGPKVKVAHDISLLVPEIFSRXTPQERDARALIEAGYLER
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S
T

TTTTTTGGGTTS

TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LEDFDHEGRRIEASRLGYRXNAAFATAYFGRIFLHPDVVFTEEXLRPELQDPAIFADSVEVIVATHRAVA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)


TT
GGGG

GGGTBS
TTSSS

GGGT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KHYVDDGSIQWAVPPLKALLEIXYSGRSEEGWTLSSPELRALFERENILASDWYAERVDAKVERDRKQAE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TSGGGGS
SS
TTS

TT
TTS
 .........1060.........1070.........1080.........1090.........1100........
Sequence SAIAALTRFTTTQGNEEVTERLDIEGRLASARAWLDEVTSPAYRAHLVGTLGLQPSLA
Predicted secondary structure
















SS confidence

























































Known secondary structure (DSSP) TSTT
TTSTTTS



GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D