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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ju3A_

Fold library idPDB HeaderMoleculeTitle
c6ju3A_4.10PDB header: viral protein/rnaChain: A: PDB Molecule: polymerase 3;


Added to library: Sat Jun 15 08:43:14 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIREIAKRFLEQATINIAEEVVREYGDHERTMISVGVHFQACCLISDEYTLEDETTPRYVLLEGLKRQEA
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Known secondary structure (DSSP)
TTS
S
S
STSS

SS

SS
S
SSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISKQNNICSTLGLEPLRNLADIFDRKTRRFLEVGITKRESDEYYQEKFNKIGNDMDIHVFTYEGKYFSNN
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Known secondary structure (DSSP) T



S


SSSSSS

SS
TTTTSS
SSS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PNGLEDIQKTRIFTFLSFVSDELRKENMFTEMYVTELEMYKSKLFIAMRDESVPLPYINYEHLRTRCETF
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Known secondary structure (DSSP)


S
SST
STT










STS
TT
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KRNQAECEAKVADVASRLKIKLEHLEENKLRPLEIPKEKEAPYTHKFLMKDAWFFAKPHDSERAQPQQIL
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Known secondary structure (DSSP)


STTSS




SSS










SS





SS
STT






SS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YDFFEAANMGFMTTSPKPIFGKQGLMYHSLWGQTKRAIKDKRNELEPSEQRDFLCGIGRASKKIQEDKWQ
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Known secondary structure (DSSP) TT
SSTT
STT



SS
SS
S

TT
SS

B

S
SSTTBTTBS








SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence ESREEEFKQEETKGAAKRGFPTWFNEEWLWAMRDSKIGDWIPMAEMPPCKNEMEDYAKKMCEELESKIQG
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Known secondary structure (DSSP)

SSTT














STTS






S








SSTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TNCAREMSKLIHTIGSLHTECRNFPGKVKIVPIYCRGTLRGESTDCLFGIAIKGKSHLNKDDGMYTVVTF
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Known secondary structure (DSSP) SS
TT

B

TT







SS


 .........500.........510.........520.........530.........540.........550.........560
Sequence EFSTEEPNPSKHEKYTVFEAGTVPVEAKEKKLFLYCRTTGMSKLKNDWFSKCRRCLIPTMETVEQIVLKE
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Known secondary structure (DSSP)
S


TTTSTT











TTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence CALKEENRVSEMLENKRAWIAHENGENLTRLVSTKLKDLCRMLIVTQFYYCIYNDNQLEGFCNEQKKFLM
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Known secondary structure (DSSP) TTTTS

STTTTTS

SS

SS
GGGS
S
 .........640.........650.........660.........670.........680......
Sequence FLQADKDSKSAFTFNQKGLYEKIEECIVSNPLCIFLADRLNKLFLVAKSNGAKYFE
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Known secondary structure (DSSP) TT


S
S
SS
TTTT
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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