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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jsiB_

Fold library idPDB HeaderMoleculeTitle
c6jsiB_4.70PDB header: transferaseChain: B: PDB Molecule: fatty acid synthase subunit beta;


Added to library: Sat Sep 28 10:19:23 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSS
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Known secondary structure (DSSP)
B

SSS

B



TTSSTTTTTTT
SSSSSTTTSSTTSSSS
SSTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPQLVA
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Known secondary structure (DSSP)
SSS
S
TTTTTSSS
TTTTS


STTSSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence IFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK
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Known secondary structure (DSSP)


S
S
S
SSTT
STTTTTTTTSTTSTTT

S




SSSS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRK
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Known secondary structure (DSSP) TTSSSTT

S
S




T

SSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI
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Known secondary structure (DSSP) S





TT

S

S
S

TTS
GGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence SLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDL
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Known secondary structure (DSSP)

SSS
S
SS


S


SSS








B


SS

S
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence INKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGG
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Known secondary structure (DSSP) TT




TT

S



SSS






SS
STTTTTT



T



S



SSG
 .........500.........510.........520.........530.........540.........550.........560
Sequence ASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGFKQEIFDVTSNGLKKNPNWLEEYHPKLIKNKSXXXX
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Known secondary structure (DSSP) GGSSSTT

SS


SS



SSTTS

SSTTS
SS






BTTBS






TT





S
 .........570.........580.........590.........600.........610.........620.........630
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
B

SSS

STTSSS

B




S

SSSGGGSSSSS
SS





SSSTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S




SS


STTSS

S



STTT
S

S





SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S


S
TTTTTSSTTTTTS

SS
B

B
S

SSSTT

SSSS



S
B

SSSSSSSSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S






TTTTSS

SSSSSS
B


GGGS


B

STTT




SS
TTSTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TGGGTTTTTSSSS

SS
SSS


TTS
BTTTS

SS

S
STTTTTTTSS

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S


S

S



TTTSSTTTTTTSTTTTTSB

TTTTTTTS
SSS


SS


TTS






SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)


SS
S


SS




SS

ST
SS

STTTSTTT
SS


SSSS







SS


SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT


STTS





SSS






SSS










SSS





S
TTTTTTTST
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTS
SS





SS









STTTTT



TTTTTSSSS



SSSSTGGGTTTTTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S
TTTS


STT



B


SS



S





B



B


SSS



SSS
S

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
TTSSSS
SSTT
B
B






B


SSTTTSS


SSTTTTTGGGGTS
B





B

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SSS



B








SSS












SSS
STGGGTTTTS

S





SS









 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL
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Known secondary structure (DSSP)



S
STTTGGGTS


SSSSTTGGGGT
SSS

B
T
SSTT










 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence PNTALKTSIQHVGMINGRKLIKFETRNEDDVVVLTGEAEIEQPVTTFVFTGQGSQEQGMGMDLYKTSKAA
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Known secondary structure (DSSP)
BS







TTT




TT



S

B













S



S
TTTT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence QDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINE
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Known secondary structure (DSSP) TTS


SS


SS






SSTTTTTTSSTTSS


SSSS
SS


SS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence HSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESL
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Known secondary structure (DSSP) S







SS
SS
TTTTTT


SS




SSSTTTTTSSSSS

S
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence VEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQ
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Known secondary structure (DSSP) TGGG



SS


S



SS
SSSSTTTTTS






SS

T
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence YVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHLFEIIDEASKKSAVKPRPLKLERGFACI
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Known secondary structure (DSSP) STTTT



S

SS
SSTTTTTSTTT
SS




SS




S
SSTT
SS
SS
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence PLVGISVPFHSTYLMNGVKPFKSFLKKNIIKENVKVARLAGKYIPNLTAKPFQVTKEYFQDVYDLTGSEP
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Known secondary structure (DSSP) STSTTS
S



TT
S



TTS
S

SS

GGGTTT

SSTTTSSSS
SSSS


STT
 .........1900....
Sequence IKEIIDNWEKYEQS
Predicted secondary structure

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Known secondary structure (DSSP) TTTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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