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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jsiA_

Fold library idPDB HeaderMoleculeTitle
c6jsiA_4.70PDB header: transferaseChain: A: PDB Molecule: fatty acid synthase subunit alpha;


Added to library: Sat Sep 28 10:05:43 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
TTTT


B


SSS
STS
TT
SS



B

SS
S



SS






 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S
SS

TTTTTTTTTT
SS
S
SS
SSS
SS

SSSTTSSSS

SSSSS

TTSTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)
SSSS
S


GGGTSSTTSTTTSSSSSS

TTTTTSSS
SSSS
SSSSSSTTTSS

SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTGGGSSTTSSTTTTS
S

S




STTTTTTT

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence XXXXXXXXXXXXXXXRKLSQYVQEMALGGPITKESQPTIEEDLTRVYKAISAQADKQDISSSTRVEFEKL
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Known secondary structure (DSSP) SSSTTTS




SSSTS
TTTTTTSSS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YSDLMKFLESSKEIDPSQTTQLAGMDVEDALDKDSTKEVASLPNKSTISKTVSSTIPRETIPFLHLRKKT
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Known secondary structure (DSSP) S
SS
SS





S





SSS






SS
SSTTTTS
STTSS
SS




B
 .........430.........440.........450.........460.........470.........480.........490
Sequence PAGDWKYDRQLSSLFLDGLEKAAFNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV
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Known secondary structure (DSSP) TTBS



TSTTS




S





STTST

S

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHI
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Known secondary structure (DSSP)

TT



SSSGGGTT

TTTT














S

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence DSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWH
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Known secondary structure (DSSP)
TTTTTT
TTS


B

S
TTTSSS
TTTTSTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence SESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA
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Known secondary structure (DSSP) SSS
TTTB
B






TTS

TTTT
SSGGGTSS





TTTTTSTTTTTS
B

 .........710.........720.........730.........740.........750.........760.........770
Sequence DLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGLERVIVVTGFAEVGPWGSARTRWE
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Known secondary structure (DSSP)

S
SGGGSS
TT



S





SSSSTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence MEAFGEFSLEGCVEMAWIMGFISYHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEP
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Known secondary structure (DSSP)
SS

TTTGGG
SS

SSSSSSSS



STTTS
S


SSS
SSSSSSTTTTTTSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence ELFNGYNPEKKEMIQEVIVEEDLEPFEASKETAEQFKHQHGDKVDIFEIPETGEYSVKLLKGATLYIPKA
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Known secondary structure (DSSP) S

SSSSS


SSSB
















TTTTTTS
SSS





TTSS




S






 .........920.........930.........940.........950.........960.........970.........980
Sequence LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSG
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Known secondary structure (DSSP)


B


S






S


SS

BTTBTTSTT

SGGGGGGS


S






 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence SGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVET
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Known secondary structure (DSSP)

S


TTTTSSS




S

SGGGSSSTSS


S






TTS
SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIM
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Known secondary structure (DSSP) STT

S






GGGSSSSSSSSSS


SSSSSS


TTTS

SSSS

S









 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNKRDPRIXXXXXXXXXX
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Known secondary structure (DSSP)
SSTTTTT


















SSS


SSSSSSSSTT



SS







S



TTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT

SS



B


TTTGGGGTTS
TTTSTTS


STTTTTSSSS
STTTSSSGGGTTTTT
 .........1270.........1280.........1290.........1300.........1310.........1320.
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) T


SS
S




SSSSS


S
TT

SSSSTTTTTTS
S

B





SS


B

B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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