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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jshB_

Fold library idPDB HeaderMoleculeTitle
c6jshB_5.10PDB header: transferaseChain: B: PDB Molecule: fatty acid synthase subunit beta;


Added to library: Sat Sep 28 09:27:33 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSS
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Known secondary structure (DSSP)

TTS




SSSSTTTTTTTTSSSSSTTTSSTT
SSS
SSTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPQLVA
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Known secondary structure (DSSP)
SSS


GGGTTTTTTSSS
TTS


SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence IFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK
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Known secondary structure (DSSP)

S
S
S
SS
STTTSTTSTTT

S




TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence DYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRK
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Known secondary structure (DSSP) SSTTT

S
S




TTTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI
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Known secondary structure (DSSP) S





TT

S

S
SS
SSTTS
STT

 .........360.........370.........380.........390.........400.........410.........420
Sequence SLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDL
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Known secondary structure (DSSP)

SSS
S
TTB

S
S
SSS


B




B
S
SS
TT
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence INKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGG
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Known secondary structure (DSSP) TTTT
TT

TT

S



SSS


S


SS
STTTT







S
SST
 .........500.........510.........520.........530.........540.........550.........560
Sequence ASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGFKQEIFDVTSNGLKKNPNWLEEYHPKLIKNKSXXXX
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Known secondary structure (DSSP) TTSS

SS


SS
S


STTS

SGGGS

S






TTTSS






TTS




S
 .........570.........580.........590.........600.........610.........620.........630
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SSSSSSSTTTSSS




S
TTTTS
SS





SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTS




SS


TTTTTS


S




STTTTTS

BB





S
 .........710.........720.........730.........740.........750.........760.........770
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SB




SS
SGGGS
STT

B


S


SSTTTT

SSSS



S



SS
GGGSTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) ST





TTTSSS

SSS
SS


SSSS
B

SGGGTTSS
TTSTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSSS




SSS


TTTSBSS
SSS

S
S

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S


S

S



TTSTTTTTSB

TTTTT
SSS


SS


STT






TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S

SS
SS

SS




S


STTT

S

GGGSSSSTT
S



SS








SS



SG
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) GG
B


STTS

B


B

SSS






STT










SSS





S
T
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTS
SS





SS




B



TTS



STTSSSSSS
B

TTSSTTTTTTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TSSSS
S

SS
BB




B

SS


BSS

B






SSS



SSS


B
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

TTTTSSTTSTT
B










STTTTSSTTTSS


TTTTTTTTGGGS






 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

SSS


B




SSS






B
SSS

TTTTTTTTS









S









 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL
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Known secondary structure (DSSP)
SGGG
TTTTGGGTS


STTSTTT

SSS


TT
SSGGG










B
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence PNTALKTSIQHVGMINGRKLIKFETRNEDDVVVLTGEAEIEQPVTTFVFTGQGSQEQGMGMDLYKTSKAA
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Known secondary structure (DSSP)

SS


B






TTS



B

SSS

SS














S



S
SS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence QDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINE
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Known secondary structure (DSSP) S
S
S


SS






SSTTTTTTSS


SSSS
SS


SS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence HSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESL
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Known secondary structure (DSSP) S







TT
SS
TTTTT
S
SS




STTTTSSSS

S
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence VEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQ
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Known secondary structure (DSSP) TTTT


TTTT

S


SS
SSTTTTTTTTT








SS
T
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence YVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHLFEIIDEASKKSAVKPRPLKLERGFACI
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Known secondary structure (DSSP) TTTTT

S
S
SSS
SSTTTTTT
SS




SS



S

SSSSGGGSST
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence PLVGISVPFHSTYLMNGVKPFKSFLKKNIIKENVKVARLAGKYIPNLTAKPFQVTKEYFQDVYDLTGSEP
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Known secondary structure (DSSP) TTTTT
SS


TTSTT


SSSS



S

GGGTTT
TTTTTTTSSSSS

STTTTTT
 .........1900....
Sequence IKEIIDNWEKYEQS
Predicted secondary structure

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Known secondary structure (DSSP) TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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