PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6jp6A_

Fold library id	PDB Header	Molecule	Title
c6jp6A_	2.70	PDB header: transferase	Chain: A: PDB Molecule: trna (guanosine(34)-2'-o)-methyltransferase non-catalytic

Links to external resources
Added to library: Sat Oct 5 09:49:42 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K D L S H Y G P A L C V K F Y N D Y V L A G Y G P F I H V Y D Y H S A T L I N K C R L F H Y N K V H G L S L S S E G K I L A Y G A R S V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T T
S S S
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I V E L E D V L K K E S L V D F E R I N S D W I T G A T F S F D N L Q I Y L L T C Y N K V L I C D L N C E V L F R K S L G G E R S I L Y S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
G G G
S S
T T S S S T T S
T T S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I I K V F G P D K V Y V N A G T V M G G V I I W D L F S E T K I H N L L G H E G S I F Y V N L S N N G R Y V A S C S D D R S I R L W D L E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S
T T T T
S S
T T S S T T S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G K Q L S V G W S H T A R I W N L M F F D N D S K L I S V S E D C T C R V W N I I E S R E N V A E L S I S N V Y E V H L I K S I W G V D V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T S
S S S S
S
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D D E M I A V T S G N D G R L K L I D L L Q L K R H G D E E T S F S L D D I A K Q C G D I F E K N E S I K G F Q W F S F G V I A I T S L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T S
T T T T T S S S
S
S
T T
T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence I L K Y S D V T K Q W K L L L T N E K F N S Y P I T N G I Q T Q N I A V F S N N K S D I L L I K F S K D S A D I I E T E E F H L D E L S K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
G G G G S S
G G G T
T T S
T T T
T T
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence N N C L V T E Y D D D S F L L T L Q S P N P R E K F V C L E I S L Q N L K I K S K H C F N K P E N F S S S C L T S F R N H I L V G S R F S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T S
T T T
S S
T T S T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence L V I Y N L L D E S E E P F I I R R L S P G D T T T S I E F V E D K D N S A V F S V T N R D G Y Y V F I E L T K N R L S Y K V L H S N K M M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S S S
S
T T T T S
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence K G F L E G A F F N S K G E Y I T Y G F K S S L F Y L Y N E T N C Y E L A S E V C G G S H R L W N L A K I T D G H V L M Y I K A S R F H L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
T T T T T T
T T
S T T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence K I Y N S I V P E T L E N G V H G R E I R D I S I C P V S N T N T N D N F K D G H I F C T A S E D T T I K L G Y F N N R T G K V Q N F W T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S
S S
G G G T T T T S
T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence R K H V S G L Q R C Q F I N H K L M I S S S A R E E L F L W E L N D K Y N K R P Y M T I R Q A L P V S D L R I M D F D V K F I S Q S G D F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
S T T
S S S
T T S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence L V T V Y S D S T I K I W H Y R E N Q N K F D L I M Q G R Y K T C C L F N V V F I A L K E E L L V V I S P T D G H L V V Y N I T E Y V P F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T T
S S
T T T T S
G G G S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence V D P I S G D L V D H K L D A T I S N L P A P V A Q L P V H Q S G V K S L D Y V A N A T R T S A T I L T G G D D N G L G L S N L K L D D S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S
S S
T T S S T T S
T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence K V T L K T S D F I A A A A S S T I T S G M L I N G G K E V I T T S V D Q V I R A W E I T A G K L S L V D K K R T T V A D T G S L E I I S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S
T T T T T T S T T
S

. . . . . . . . . 990 . . . . . . . .

Sequence D S E K T L L I G G V G L S I W K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	D	L	S	H	Y	G	P	A	L	C	V	K	F	Y	N	D	Y	V	L	A	G	Y	G	P	F	I	H	V	Y	D	Y	H	S	A	T	L	I	N	K	C	R	L	F	H	Y	N	K	V	H	G	L	S	L	S	S	E	G	K	I	L	A	Y	G	A	R	S	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T							T	T							T	T	T	T									S	S	S										T	T	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	V	E	L	E	D	V	L	K	K	E	S	L	V	D	F	E	R	I	N	S	D	W	I	T	G	A	T	F	S	F	D	N	L	Q	I	Y	L	L	T	C	Y	N	K	V	L	I	C	D	L	N	C	E	V	L	F	R	K	S	L	G	G	E	R	S	I	L	Y	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	B		G	G	G					S	S									T	T	S	S	S						T	T	S							T	T	S									S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	I	K	V	F	G	P	D	K	V	Y	V	N	A	G	T	V	M	G	G	V	I	I	W	D	L	F	S	E	T	K	I	H	N	L	L	G	H	E	G	S	I	F	Y	V	N	L	S	N	N	G	R	Y	V	A	S	C	S	D	D	R	S	I	R	L	W	D	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S									T	T	S							T	T	T	T										S	S									T	T	S	S							T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	K	Q	L	S	V	G	W	S	H	T	A	R	I	W	N	L	M	F	F	D	N	D	S	K	L	I	S	V	S	E	D	C	T	C	R	V	W	N	I	I	E	S	R	E	N	V	A	E	L	S	I	S	N	V	Y	E	V	H	L	I	K	S	I	W	G	V	D	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S									T	T	T	T							T	T	S											S	S	S	S												S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	D	E	M	I	A	V	T	S	G	N	D	G	R	L	K	L	I	D	L	L	Q	L	K	R	H	G	D	E	E	T	S	F	S	L	D	D	I	A	K	Q	C	G	D	I	F	E	K	N	E	S	I	K	G	F	Q	W	F	S	F	G	V	I	A	I	T	S	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T							T	T	S							T	T	T	T	T	S	S	S		S															S				T	T										T	T							T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	L	K	Y	S	D	V	T	K	Q	W	K	L	L	L	T	N	E	K	F	N	S	Y	P	I	T	N	G	I	Q	T	Q	N	I	A	V	F	S	N	N	K	S	D	I	L	L	I	K	F	S	K	D	S	A	D	I	I	E	T	E	E	F	H	L	D	E	L	S	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T										G	G	G	G	S	S							G	G	G	T							T	T	S									T	T	T												T	T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	N	C	L	V	T	E	Y	D	D	D	S	F	L	L	T	L	Q	S	P	N	P	R	E	K	F	V	C	L	E	I	S	L	Q	N	L	K	I	K	S	K	H	C	F	N	K	P	E	N	F	S	S	S	C	L	T	S	F	R	N	H	I	L	V	G	S	R	F	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T									S		T	T	S									T	T	T													S	S										T	T							S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	V	I	Y	N	L	L	D	E	S	E	E	P	F	I	I	R	R	L	S	P	G	D	T	T	T	S	I	E	F	V	E	D	K	D	N	S	A	V	F	S	V	T	N	R	D	G	Y	Y	V	F	I	E	L	T	K	N	R	L	S	Y	K	V	L	H	S	N	K	M	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	S								S	S	S		S												T	T									T	T	S																							S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	G	F	L	E	G	A	F	F	N	S	K	G	E	Y	I	T	Y	G	F	K	S	S	L	F	Y	L	Y	N	E	T	N	C	Y	E	L	A	S	E	V	C	G	G	S	H	R	L	W	N	L	A	K	I	T	D	G	H	V	L	M	Y	I	K	A	S	R	F	H	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									T	T	S									T	T							T	T	T	T										T	T			S							T	T									T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	I	Y	N	S	I	V	P	E	T	L	E	N	G	V	H	G	R	E	I	R	D	I	S	I	C	P	V	S	N	T	N	T	N	D	N	F	K	D	G	H	I	F	C	T	A	S	E	D	T	T	I	K	L	G	Y	F	N	N	R	T	G	K	V	Q	N	F	W	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		S								S	S												S	S				G	G	G	T	T									T	T	S									T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	K	H	V	S	G	L	Q	R	C	Q	F	I	N	H	K	L	M	I	S	S	S	A	R	E	E	L	F	L	W	E	L	N	D	K	Y	N	K	R	P	Y	M	T	I	R	Q	A	L	P	V	S	D	L	R	I	M	D	F	D	V	K	F	I	S	Q	S	G	D	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									S	S	S							S	T	T											S	S	S																										T	T	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	V	T	V	Y	S	D	S	T	I	K	I	W	H	Y	R	E	N	Q	N	K	F	D	L	I	M	Q	G	R	Y	K	T	C	C	L	F	N	V	V	F	I	A	L	K	E	E	L	L	V	V	I	S	P	T	D	G	H	L	V	V	Y	N	I	T	E	Y	V	P	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S									T	T	T	T												S	S											T	T									T	T	S								G	G	G	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	D	P	I	S	G	D	L	V	D	H	K	L	D	A	T	I	S	N	L	P	A	P	V	A	Q	L	P	V	H	Q	S	G	V	K	S	L	D	Y	V	A	N	A	T	R	T	S	A	T	I	L	T	G	G	D	D	N	G	L	G	L	S	N	L	K	L	D	D	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T																		S							S	S											T	T	S	S									T	T	S											T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	K	V	T	L	K	T	S	D	F	I	A	A	A	A	S	S	T	I	T	S	G	M	L	I	N	G	G	K	E	V	I	T	T	S	V	D	Q	V	I	R	A	W	E	I	T	A	G	K	L	S	L	V	D	K	K	R	T	T	V	A	D	T	G	S	L	E	I	I	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S	S	S									T	T	T	T							T	T	S									T	T											S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.
Sequence	D	S	E	K	T	L	L	I	G	G	V	G	L	S	I	W	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S