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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jooA_

Fold library idPDB HeaderMoleculeTitle
c6jooA_2.90PDB header: hydrolase/dna/rnaChain: A: PDB Molecule: crispr-associated protein,crispr-associated endonuclease


Added to library: Sat Apr 20 08:26:55 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHXKYHVGIDVGTFSVGLAAIEVDDAGXPIKTLSLVSHIHDSGLDPDEIKSAVTRLASSGIARRTRRLYR
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Known secondary structure (DSSP)




SS
SSS


TTB
TTS
SS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence RKRRRLQQLDKFIQRQGWPVIELEDYSDPLYPWKVRAELAASYIADEKERGEKLSVALRHIARHRGWRNP
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Known secondary structure (DSSP) TT




TTTSS
TTTTS



S

B

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YAKVSSLYLPDGPSDAFKAIREEIKRASGQPVPETATVGQXVTLCEKLRGEGGVLSARLQQSDYAREIQE
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Known secondary structure (DSSP) TS
GGGGSS

S

S



SS

TT


SSTTTSGGG

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence ICRXQEIGQELYRKIIDVVFAAESPKGSASSRVGKDPLQPGKNRALKASDAFQRYRIAALIGNVEEKNLV
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Known secondary structure (DSSP) TT

T




GGGGSTT

B
SSSTTSBSSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FDHLVNLTPARPPTHDTNRSIVNSRIAPLVDWWKTASALEQHAXVKALSNAEVDDFDSPEGAKVQAFFAD
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Known secondary structure (DSSP)







T

S
STTS


SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LDDDVHAKLDSLHLPVGRAAYSEDTLVRLTRRXLSDGYTARLQEFGIEPSWTPPTPRIGEPVGNPAVDRV
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Known secondary structure (DSSP) S






T


T

TT






TT


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LKTVSRWLESATKTWGAPERVIIEHSVAWXANELRSRVAQHFASHGTTVRVYRGSLTAEGKLKFFDGVGK
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Known secondary structure (DSSP)
S
S


TTTTT





B
SSSBS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SRLDRRHHAIDAAVIAFTSDYVAETLAVRSDAEHRAAWRVWCQKXEKLSALLTEDLRDDRVVVXSNVRLR
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Known secondary structure (DSSP)
SSBTTTT



T






S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LGNGSAHKETIGKLSKVKLSSQLSVSDIDKASSEALWCALTREPGFDPKEGLPANPERHIRVNGTHVYAG
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Known secondary structure (DSSP) S

S
SS
S

B

TTS
B
TTBSSTSTT
BTTTBB


TT

TT
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence DNIGLFPVSAGSIALRGGYAELGSSFHHARVYKITSGKKPAFAXLRVYTIDLLPYRNQDLFSVELKPQTX
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Known secondary structure (DSSP) S
SSSS
TT
TT


SS

SGGGSTTTTS
GGG



TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence SXRQAEKKLRDALATGNAEYLGWLVVDDELVVDTSKIATDQVKAVEAELGTIRRWRVDGFFSPSKLRLRP
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Known secondary structure (DSSP) TS
T

TT


TTTT





TT
 .........780.........790.........800.........810.........820.........830....
Sequence LQXSKEGIKKESAPELSKIIDRPGWLPAVNKLFSDGNVTVVRRDSLGRVRLESTAHLPVTWKVQ
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Known secondary structure (DSSP) TTB
GGG

TTS
TSS
B

BS


B
TTS
B



SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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