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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jomB_

Fold library idPDB HeaderMoleculeTitle
c6jomB_2.45PDB header: ligaseChain: B: PDB Molecule: lipoate--protein ligase;


Added to library: Sat Mar 28 08:37:36 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MYLIEPKRNGKWVFDGAILLAIQYWAIKNLKLDETIVFPYICDPHVQIGYFQNPSVEVNLELLKQKNIEV
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Known secondary structure (DSSP)



TT





SS



S
TT

B
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VRRDTGGGAIYLDRNGVNFCFSFPYEKNKNLLGNYAQFYDPVIKVLQNIGIKNVQFSGKNDLQIEGKKVS
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Known secondary structure (DSSP)
SS
S


TTSGGGTTTTT
TT
TT

SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GAAMSLVNDRIYAGFSLLYDVDFDFIGKILTPNRVTNLKNKLSKEYQNFSIFEIKDLFLTEFLKVNSVEK
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Known secondary structure (DSSP) TTSS

B



B

SGGGS
GGGTT

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FKKYELTDSDWVQIDKMVAEKYKNWDFVWGLSPNYSFNRSIRTKVGTITFSLEINEGKISKIKISGDFFP
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Known secondary structure (DSSP)




TTT
TTSS


S
SS
TTS


 .........290.........300.........310.........320.........330
Sequence KKSLLELENFLMGTKLTQDQLLNRLKDAKLEDYFSQKIDEEEICNLLLNL
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Known secondary structure (DSSP) SS
STT
BSSTTGGGT
SS


T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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