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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jf1A_

Fold library idPDB HeaderMoleculeTitle
c6jf1A_1.95PDB header: transport proteinChain: A: PDB Molecule: lipoprotein;


Added to library: Sat Jul 13 08:19:29 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRGSHHHHHHTTIKIATVNRSGSEEKRWDKIQELVKKDGITLEFTEFTDYSQPNKATADGEVDLNAFQHY
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Known secondary structure (DSSP)








TTTTTTTT
SSTTSTTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NFLNNWNKENGKDLVAIADTYISPIRLYSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAG
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Known secondary structure (DSSP) T







TTS
SSGGGS
TT

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIKLDVSGTALATVANIKENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKSLFKEQADNS
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Known secondary structure (DSSP) S
S

TT



GGG
TT


GGGTTGGGGSSS
GGGTTTTT

GGG
S




G
 .........220.........230.........240.........250.........260.
Sequence KQWYNIIVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVWM
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Known secondary structure (DSSP) GGG

TTGGGSTTTSTTTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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