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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jdvA_

Fold library idPDB HeaderMoleculeTitle
c6jdvA_3.10PDB header: hydrolase/rna/dnaChain: A: PDB Molecule: crispr-associated endonuclease cas9;


Added to library: Sat Nov 9 08:35:56 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SINYILGLDIGIASVGWAMVEIDEEENPIRLIDLGVRVFERAEDSLAMARRLARSVRRLTRRRAHRLLRT
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Known secondary structure (DSSP)



SS
TT








 .........80.........90.........100.........110.........120.........130.........140
Sequence RRLLKREGVLQAANFDENGLIKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNDFRTPA
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Known secondary structure (DSSP) TTSS
SSSB
TTS
BTT

S
TTTS


S

B


S



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELALNKFEKESGHIRNQRSDYSHTFSRKDLQAELILLFEKQKEFGNPHVSGGLKEGIETLLMTQRPALSG
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Known secondary structure (DSSP) TS
SS

SS





BT

S






SS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DAVQKMLGHCTFEPAEPKAAKNTYTAERFIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYA
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Known secondary structure (DSSP) T

B
SS
TTSB

BSSST

SS


TSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence QARKLLGLEDTAFFKGLRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSPELQDEIGTAFSL
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Known secondary structure (DSSP) T


SS
SS


SSS
GGGS
S


TTSS
SSS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FKTDEDITGRLKDRIQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYGDHYGKKNT
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Known secondary structure (DSSP)

STTTS





B
SS
TT

S
TT




 .........430.........440.........450.........460.........470.........480.........490
Sequence EEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETAREVGKSFKDRKEIEKRQEENRK
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Known secondary structure (DSSP)

BSS




SSS





SS





 .........500.........510.........520.........530.........540.........550.........560
Sequence DREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKCLYSGKEINLGRLNEKGYVEIDAALPFSRTWDD
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Known secondary structure (DSSP)
TT
SS


TTSB
TTT

B

TT
SSSTTTSS



 .........570.........580.........590.........600.........610.........620.........630
Sequence SFNNKVLVLGSENQNKGNQTPYEYFNGKDNSREWQEFKARVETSRFPRSKKQRILLQKFDRNLNDTRYVN
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Known secondary structure (DSSP) SGGGTT

TTTTT
TSS

S







 .........640.........650.........660.........670.........680.........690.........700
Sequence RFLCQFVADRMRLTGKGKKRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQKITRF
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Known secondary structure (DSSP) B



SSS

TT


SS


TT

 .........710.........720.........730.........740.........750.........760.........770
Sequence VRYKEMNAFDGKTIDTGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFEEADTLEKLRTLLAEKLSS
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Known secondary structure (DSSP) S


TTT








TTS

SSTTSS
SS
S
S



SS
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence RPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEGVSVLRVPLTQLKLKDLEKMVNREREPKLYE
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Known secondary structure (DSSP)
TTSSSTT















B
S


TTTTTTGGG

TTBGGGTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence ALKARLEAHKDDPAKAFAEPFYKYDKAGNRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKG
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Known secondary structure (DSSP) TTT
TSS

TTS
S
S

TTTT
B

T
 .........920.........930.........940.........950.........960.........970.........980
Sequence DKYYLVPIYSWQVAKGILPDRAVVQGKDEEDWQLIDDSFNFKFSLHPNDLVEVITKKARMFGYFASCHRG
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Known secondary structure (DSSP) TT





SSS
GGGS

TTS
TT
TT
TT
 .........990.........1000.........1010.........1020.........1030......
Sequence TGNINIRIHDLDHKIGKNGILEGIGVKTALSFQKYQIDELGKEIRPCRLKKRPPVR
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Known secondary structure (DSSP) T


TT

TTTTBTT

SS
S


SSS







SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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