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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jc3A_

Fold library idPDB HeaderMoleculeTitle
c6jc3A_4.80PDB header: nuclear protein/rnaChain: A: PDB Molecule: nucleocapsid;


Added to library: Sat Aug 10 08:21:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSSVFDEYEQLLAAQTRPEKGSTLKVEVPVFTLNSDDPEDRWNFAVFCLRIAVSEDANKPLRQGALISLL
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Known secondary structure (DSSP)


TT










B


B




T
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CSHSQVMRNHVALAGKQNEATLAVLEIDGFTNGVPQFNNRSGVSEERAQRFMMIAGSLPRACSNGTPFVT
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Known secondary structure (DSSP) TT
SS
T
TTS
B


B




SSSS




SS

TTT


SSSSTTSSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGVEDDAPEDITDTLERILSIQAQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILHPVCRSAI
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Known secondary structure (DSSP) GGGSS



STTSS

SS



TSS
GGG


 .........220.........230.........240.........250.........260.........270.........280
Sequence QLTIRQSLAVRIFLVSELKRGRNTAGGTSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSL
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Known secondary structure (DSSP)
S
SSS
SS
S
TTTTT

GGGSSSST
 .........290.........300.........310.........320.........330.........340.........350
Sequence SGDIQKMKQLMRLYRMKGDNAPYMTLLGDSDQMSFAPAEYAQLYSFAMGMASVLDKGTGKYQFARDFMST
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Known secondary structure (DSSP) TT
TTGGG

GGGGGG
SGGGS

STTS



TT

 .........360.........370.........380.........390.
Sequence SFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQR
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Known secondary structure (DSSP)
TT



T

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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