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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6j3qE_

Fold library idPDB HeaderMoleculeTitle
c6j3qE_3.53PDB header: virusChain: E: PDB Molecule: major capsid protein;


Added to library: Sat Oct 5 08:20:24 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKLNLAVLNNVFSELLTQEINRSATFLGLLSKYPERKSNIQWGVGMGGTTATGVAITGSAPAASMDATLP
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Known secondary structure (DSSP)

STTSS





S




S




STTSS



SSB











SSS








 .........80.........90.........100.........110.........120.........130.........140
Sequence AQLPISAASVQSTFTLNLKEIEESKEQVTNEELRNLLEAQMRNAVEEIATTLNKKLYDGSGAIADGGLIG
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Known secondary structure (DSSP)


B
SS





STTTS
SSTTTTSTTTT

SSGGGTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence LSIAASGQDYAGISSATYPLWNVSEVDAWDANATGTDKRQALKTDFMLELDRKIRYRPGAYDLILTTPKV
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Known secondary structure (DSSP) SSSS
SSS

TTT
TTS





SSSSSSS





TTSTT



BB


 .........220.........230.........240.........250.........260.........270.........280
Sequence VEQYKKVFEANRSYQIMTFDGQRVPLIDLGFNVAGYMGRPIIDDVFCSRTRTAAESAITTALGTAVDEGV
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Known secondary structure (DSSP) TT







SSS












TTT

B


TT



SS
TTTTTSSS




 .........290.........300.........310.........320.........330.........340......
Sequence MYFLKKDDLRFYSTPVVGAFSANGVYTLMRQLAQTSLYVDNFVVGCIPQLQLTTRKNVGVIKNIKV
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Known secondary structure (DSSP)

BB
GGG



TT
B
GGG

BB






SSS







TTS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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