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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6j0fE_

Fold library idPDB HeaderMoleculeTitle
c6j0fE_3.80PDB header: protein transportChain: E: PDB Molecule: pvc16;


Added to library: Sat Apr 13 08:21:00 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNTQTIIDVNKAMDAMLRAYLNQDIAIRFDLPELDTMQSDAMVSIFLYDIHEDLQLRSAESRGFDVYAGR
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Known secondary structure (DSSP)


B
TTTS
TT
SS


SS



S

STT






TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLPGWVNIKCNYLITYWEASQPDNQAIQVMSQVLNALINNRQLAGIPGAYTQVVPPKESLNSLGNFWQSL
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Known secondary structure (DSSP)


B





SS
TT
SS
SSSTT
S
S


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GNRPRLSLNYSVTVPVSLNDGQDSATPVTAVSSTVEQTASLSQEVVSHALRELLITELGGGEDNRLVLSK
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Known secondary structure (DSSP) TS




B

BB





















SS
T
SSTTT
 .........220.........230.........240.........250.........260.........270..
Sequence VELSAVKETMTQDMIILLSVSGITRQEYLKEIDNIFDRWVNNAEVICGIRIESITKDNLVGI
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Known secondary structure (DSSP)








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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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