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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6iucC_

Fold library idPDB HeaderMoleculeTitle
c6iucC_3.40PDB header: dna binding protein/dnaChain: C: PDB Molecule: spooj regulator (soj);


Added to library: Sat Feb 16 08:44:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGRKQ
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Known secondary structure (DSSP)




SSTTSSTTT



TT
TT

GGG

S
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESVVGLYDYIIIDSPPALGPLTI
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Known secondary structure (DSSP)

SSTT


GGGGTS

SSTTTTT
S

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFD
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Known secondary structure (DSSP)
S
STTT
TT
SB
TTSG
 .........220.........230.........240.........250.........260....
Sequence SEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG
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Known secondary structure (DSSP) GGB
B
TTT

B


B

GGGGT


TTST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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