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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6irtA_

Fold library idPDB HeaderMoleculeTitle
c6irtA_3.50PDB header: membrane proteinChain: A: PDB Molecule: 4f2 cell-surface antigen heavy chain;


Added to library: Sat Mar 30 08:49:11 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWWHTGALYRIGDLQ
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Known secondary structure (DSSP)




SSSTTTTTS









GGGSSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence AFQGHGAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKS
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Known secondary structure (DSSP) T
SS

STTSTBS



SS
STT
TTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFS
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Known secondary structure (DSSP)


S

SSS
TT
SS

T



GGGSTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EDRLLIAGTNSSDLQQILSLLESNKDLLLTSSYLSDSGSTGEHTKSLVTQYLNATGNRWCSWSLSQARLL
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Known secondary structure (DSSP) SS






TSS

S


STT
S




S

B


S
SSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TSFLPAQLLRLYQLMLFTLPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPDIPGAVSANMTVKG
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Known secondary structure (DSSP) TTTS
TTSSSB

TTTTTT

STTS
SS
SSS




SGGG

SSTT


STTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QSEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAGPGLFSYIRHWDQNERFLVVLNFGDVGLSAGLQAS
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Known secondary structure (DSSP) TS
TTSTT




TT
SSS

SSS

B




S
 .........430.........440.........450.........460.........
Sequence DLPASASLPAKADLLLSTQPGREEGSPLELERLKLEPHEGLLLRFPYAA
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Known secondary structure (DSSP) S

STT


SSSS
S
TT

STT
B

TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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