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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ioyD_

Fold library idPDB HeaderMoleculeTitle
c6ioyD_1.94PDB header: transferaseChain: D: PDB Molecule: acetate kinase;


Added to library: Sat Apr 27 08:27:58 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASKVLVLNCGSSSVKYKLLEMPKGDVLAQGGVEKLGLPGSFLKLTMPNGEKVVLEKDMPEHTIAVEFILS
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Known secondary structure (DSSP)
TTTTTSTTSTT

TTS




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLKDDKYGCIKSYEEIDAVGHRLVHGGEKFSNSVEITPEVIAKVEECIPLAPLHNPANLKGVVAIEKLLP
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Known secondary structure (DSSP)
TTT
S
SSGGG




TTT

S


TGGGSTTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GIRQVGVFDTAFFQTMPEHVYRYALPYDMCNKHGVRRYGFHGTSHRYVSARACEILGLDYDKTRIITAHI
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Known secondary structure (DSSP) T

TTGGGGG

S
SS
T




S
T

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNGASIAAIKNGKALDVSLGMTPVEGLMMGTRSGDVDPGVLTFLMEAEGLQAAGISELINKKSGVLGVSG
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Known secondary structure (DSSP) SSSTTS

SSTTSSS

SS


S

T

S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VSSDLREIEDAIKNGNERATLAMTMYDYRIKKYVGAYAAAMGGVDVLVFTGGVGENQYTTREKVCTDMEF
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Known secondary structure (DSSP) S
S
TT
TS
S
TT
GG
 .........360.........370.........380.........390........
Sequence MGIVFDSKVNEGMRGKEMVISKPESKVTVIVVPTDEEYMIASDTMTIL
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Known secondary structure (DSSP) GT

B
TT

SS

B
TT
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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