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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6imnB_

Fold library idPDB HeaderMoleculeTitle
c6imnB_2.70PDB header: ligase/dnaChain: B: PDB Molecule: dna ligase;


Added to library: Sat Mar 2 08:29:05 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNQFPGQYSNNIFCFPPIESETKSGKKASWIICVQVVQHNTIIPITDEMFSTDVKDAVAEIFTKFFVEEG
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Known secondary structure (DSSP)

SS
STT



TTS
SS
B



SSTTTS

TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVRISKMTRVTEGKNLGKKNATTVVHQAFKDALSKYNRHARQKRGGMIPPMLVKYFNIIPKTFFEEETDP
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Known secondary structure (DSSP)




S
SS
SSTT


TS







S


GGGTSSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence IVQRKRNGVRAVACQQGDGCILLYSRTEKEFLGLDNIKKELKQLYLFIDVRVYLDGELYLHRKPLQWIAG
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Known secondary structure (DSSP)
SS
TTS

TTS
B



TSS
TT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QANAKTDSSELHFYVFDCFWSDQLQMPSNKRQQLLTNIFKQKEDLTFIHQVENFSVKNVDEALRLKAQFI
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Known secondary structure (DSSP) SSS

S


SS
TT

TTS



SS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KEGYEGAIVRNANGPYEPGYNNYHSAHLAKLKPLLDAEFILVDYTQGKKGKDLGAILWVCELPNKKRFVV
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Known secondary structure (DSSP) TT


TT





TTS



B
SGGGBT

TT

 .........360.........370.........380.........390.........400........
Sequence TPKHLTYADRYALFQKLTPALFKKHLYGKELTVEYAELSPKTGIPLQARAVGFREPIN
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Known secondary structure (DSSP) SS

S

TTTTTT
S
TTT

S
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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