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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ikmg_

Fold library idPDB HeaderMoleculeTitle
c6ikmg_3.40PDB header: antimicrobial proteinChain: G: PDB Molecule: polyamine transport protein;


Added to library: Sat Dec 28 09:07:14 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVQLVETGDEVKTPGASVKVSCKVSGYTFTSYGISWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTM
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Known secondary structure (DSSP)






B


SS





SS
GGGS
TTS

TTT


TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TRDTSISTAYMELSRLRSDDTAVYYCARDKRYMDVWGKGTTVTVSSGVLTQPPSVSGAPGQKVTISCSGS
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Known secondary structure (DSSP) TTTT
S

GGG
SSS









B

S


TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence SSNIGRNYVSWYQQLPGAAPKLLLYDNNKRPSGIPDRFSASKSGPSTTLAITGLQTGDEADYFCGVWDSS
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Known secondary structure (DSSP) TTTTTTS

TTS


BTTTB

TT

TT

TT
S

STT

TT
 .........220.....
Sequence LRAVLFGGGTKLTVL
Predicted secondary structure





SS confidence














Known secondary structure (DSSP) T
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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