Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ijbA_

Fold library idPDB HeaderMoleculeTitle
c6ijbA_2.11PDB header: ligaseChain: A: PDB Molecule: amp-binding domain protein;


Added to library: Sat Jul 6 23:45:24 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLGQMMTQPLLISSLIDHAARYHGQTEIVSVETDGTVTRTNWGEIAANARRMGSALTKLGLQPQDRIGTL
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)



S





STT

TTS
TTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AWNNRRHLEIYYAASGAGFVCHTINPRLFPEQLVYIINHAQDRVLFFDATFLPLVAAIRDQLTEVKHFVL
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)

SSTT


TTS
T
S
GGGGGG
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence MGPRNEDALQQIPGLEFYDELIETGDTDFEWPVFDENTASSLCYTHPKGVLYSHRSTVLHSFASNTRDVI
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP) SSS

STT
GGGS
TT






TTS



TSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GYSAMDVVMPVVPMFHVNAWGSPYGCAMSGAQMVLPGPDLHGEALVNLIDTYGVTLAMGVPTIWQGLLAH
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)


TT

S
TTSGGGGGT

TT

ST
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAKCGTKLESLERTVIGGAACPPSMIATFREKYGVDTVHAWGMSEMSPLGTANIPLAKHRKLPIEEQHKL
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP) T


TT


SS





GGGSS



GGGGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RENQGRPPFGVELKIVDDDGNDLPHDGVTQGDLMVRGHWVLDSYFQLKDQELLQDGWFATGDVATLDPDG
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) TSSSBB

TT
TTS
B


SSS

TTS
SS
TT
TTS


BTTB
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YMTIRDRSKDIIKSGGEWISSVELENIAVAHPKLATAAVIGVPHPKWDERPLLVAVKAEGEDPSEAELLE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
GGG

TTS
TSTTTTT
TT



 .........500.........510.........520.........530...
Sequence FFDGKIAKWQVPDKVVFVDALPLNATGAVLKRKLRDEFKDALT
Predicted secondary structure




















SS confidence










































Known secondary structure (DSSP) TTBTTB
GGGS
S
SS

B
TTSSB
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D