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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ii6B_

Fold library idPDB HeaderMoleculeTitle
c6ii6B_2.10PDB header: toxin/protein bindingChain: B: PDB Molecule: putative rtx-toxin;


Added to library: Sat Aug 10 08:20:20 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLEKDFKRYGDALKPSKDIRTTKDFLNGYKNDHAKEIVDGFRSDXSIKQLVDLFVKGSWSAEQKGALAWE
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Known secondary structure (DSSP)





GGGS
STT

TT

TT

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence IESRALKVTFQNKSEKYNRLFREIASAGVVDAKATEQLAPQLXLLNLSNDGFGGRSDPLSKLVLVAKQLE
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Known secondary structure (DSSP) SSS

TT


TT

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence NDGQVGVARQLLEKXYSAAAVLSNPTLYSDSENANASKLLSSLAAIHAKNPXHDTSXKVWQEKLEGKQAL
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Known secondary structure (DSSP) TT

SSGGGS
T
GGG
SSS


GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence TVNGVVEKITDASANGKPVLLELDAPGHAXAAWAKGSGDDRVYGFYDPNAGIVEFSSAEKFGDYLTRFFG
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Known secondary structure (DSSP) B
SS
SSS
TT
SGGG
TTTS
S
 .........290.........300.........310.........320.........330.........340
Sequence KSDLNXAQSYKLGKNDAGEAIFNRVVVXDGNTLASYKPTFGDKTTXQGILDLPVFDATPX
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Known secondary structure (DSSP) TTTT
TT

TTS

S



STT



T


S
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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