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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ii2C_

Fold library idPDB HeaderMoleculeTitle
c6ii2C_3.50PDB header: toxinChain: C: PDB Molecule: putative rtx-toxin;


Added to library: Sat Aug 10 08:28:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVAIENDGTPPRDKESLSPLTRFLNNELYGEKDARRKIGEITQTLLDHAVQKVTLKGEVGRLTGYYHQGA
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T




SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence ASSGKVVLFLHGSGSSAEEQASEIRNHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDK
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SSS
TTT


TTSTT

S


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GIDPSNIIIHGYSMGGPIAADLARYAAQNGQAVSGLLLDRPMPSMTKAITAHEVANPAGIVGAIAKAVNG
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Known secondary structure (DSSP)


STTTTTT


SS

S
TTSS

STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFSVEKNLKGLPKETPILLLTDNEGLGEEGEKLRAKLAIAGYNVTGEQTFYGHEASNRLMGQYADQIVSG
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TTS
TTSB
SST


B
SS
TT
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFNAEQAAVEAGEVLKGLEKKDFLNGYKNDHAKEIVSIKQLVDLFSAEQKGALAWEIESRALKVTFQNKS
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Known secondary structure (DSSP) SSSTT



STTS




STTGGGS



 .........360.........370.........380.........390.........400.........410.........420
Sequence EKYNRLFREIAAKATEQLAPQLSDPLSKLVLVAKQLENDGQVGVARQLLEKMYSAAAVLSNPTLYSDSEN
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TT

SSSTTTS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ANASKLLSSLAAIHAKNPVWQEKLEGKQALTVNGVVEKITDKPVLLELDAPGHAMAAWAKGSGDDRVYGF
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Known secondary structure (DSSP) S




GGG

B



SS

STTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YDPNAGIVEFSSAEKFGDYLTRFFGKSDLNMAQSYKLGKEAIFNRVVVMDGNTLASYKPTFGDKTTMQGI
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Known secondary structure (DSSP)
TTS
S
STTTT






B
S


SSTT



 ........
Sequence LDLPVFDA
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Known secondary structure (DSSP) T

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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