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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6igdG_

Fold library idPDB HeaderMoleculeTitle
c6igdG_2.50PDB header: structural proteinChain: G: PDB Molecule: major capsid protein l1;


Added to library: Sat Nov 24 08:34:05 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KVVSTDEYVSRTSIYYYAGSSRLLAVGNPYFSIKNPTNAKKLLVPKVSGLQYRVFRVRLPDPNKFGFPDT
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Known secondary structure (DSSP)



GGGT



BSS

TT
B

TTB



GGGS

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence SFYNPDTQRLVWACVGLEIGRGQPLGVGVSGHPYLNKFDDTETSNRYPAQPGSDNRECLSMDYKQTQLCL
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Known secondary structure (DSSP) TTS
TTT
S

B






B
SS


SS



S





 .........150.........160.........170.........180.........190.........200.........210
Sequence IGCKPPTGEHWGKGVATDCPPLELFNSIIEDGDMVDTGFGCMDFGTLQANKSDVPIDICNSTCKYPDYLK
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Known secondary structure (DSSP) SS











TT


SS
SBB
TTS
SS
TTTTTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence MASEPYGDSLFFFLRREQMFVRHFFNRAGKLGEAVPDDLYIKGSGNTAVIQSSAFFPTPSGSIVTSESQL
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Known secondary structure (DSSP) TSSS

S
S


S

SS


GGGS



GGGSS









STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence FNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMTLCTEVTKESTYKNDNFKEYVRHVEEYDLQFVFQ
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Known secondary structure (DSSP) SSS



SSS

SB
GGGTTB


SS

SS

GGG
 .........360.........370.........380.........390.........400.........410....
Sequence LCKITLTAEIMTYIHTMDSNILEDWQFEDPLNKYTFWEVNLKEKFSADLDQFPLGRKFLLQSGL
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Known secondary structure (DSSP)


TT


GGGGS


TT

BS
GGGST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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