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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ie2A_

Fold library idPDB HeaderMoleculeTitle
c6ie2A_2.80PDB header: oxidoreductaseChain: A: PDB Molecule: nucleic acid dioxygenase alkbh1;


Added to library: Sat Sep 21 09:19:43 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GEDAFRKLFRFYRQSRPGTADLEGVIDFSAGAQKVIKSQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYP
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Known secondary structure (DSSP)

SS

TTSGGGTT
B
S


TTT



TTTS
TTB

GGG


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GFIFIPNPFLPGYQWHWVKQCLKLYSQKPNVCNLDKHMSKEETQDLWEQSKEFLRYKERSLLEKLRWVTV
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Known secondary structure (DSSP)



B
TTTTTTTSSSS
BGGGGS

TTS



STTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GYHYNWDSKKYSADHYTPFPSDLGFLSEQVAAACGFEDFRAEAGILNYYRLDSTLGIHVDRSELDHSKPL
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Known secondary structure (DSSP)


TTT



SSS


TT

S



TT





SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVL
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Known secondary structure (DSSP) S

SSTTS


TT

GGGTT



TTSSS

GGGSS


SS
 .........290.........300.........310.........320.
Sequence PRDSMVEPCSMEDWQVCASYLKTARVNMTVRQVLATDQNFP
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Known secondary structure (DSSP)
TT
S




TS

S
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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