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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6iddC_

Fold library idPDB HeaderMoleculeTitle
c6iddC_2.38PDB header: viral proteinChain: C: PDB Molecule: hemagglutinin;


Added to library: Sat Nov 30 08:25:15 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNIPRICSKGKRTVDLGQCGLLGTITGPPQCDQFL
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Known secondary structure (DSSP)
B

SS

SS
S




BSS
TTS

TTB
TT

GGGGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EFSADLIIERREGSDVCYPGKFVNEEALRQILRESGGIDKEAMGFTYSGIRTNGATSACRRSGSSFYAEM
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Known secondary structure (DSSP) T
B
S
TT
BS
SSS

BTTTS
B




SSSB



BSSS
SSSSB

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KWLLSNTDNAAFPQMTKSYKNTRKNPALIVWGIHHSVSTAEQTKLYGSGNKLVTVGSSNYQQSFVPSPGA
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Known secondary structure (DSSP)
B
SSSS








SSS

SS
SS



SS



B





 .........220.........230.........240.........250.........260.........270.........280
Sequence RPQVNGLSGRIDFHWLMLNPNDTVTFSFNGAFIAPDRASFLRGKSMGIQSGVQVDADCEGDCYYSGGTII
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Known secondary structure (DSSP)


BTTB


TT

SS

S


SS
TT


STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence SNLPFQNIDSRAVGKCPRYVKQRSLLLATGMKNVPELFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTA
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Known secondary structure (DSSP)

SS
S
TT
S


S
S


S
B





S




S


BTT

S
STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADYKSTQSAIDQITGKLNRLIEKTNQQFELIDNEFTEVEKQIGNVINWTRDSITEVWSYNAELLVAMENQ
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Known secondary structure (DSSP)
BS





B


S
SSS


 .........430.........440.........450.........460.........470.........480....
Sequence HTIDLADSEMDKLYERVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSKYREEAMQN
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Known secondary structure (DSSP) GGG
SSSSS


TT


GGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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