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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6iczY_

Fold library idPDB HeaderMoleculeTitle
c6iczY_3.00PDB header: splicingChain: Y: PDB Molecule: atp-dependent rna helicase dhx8;


Added to library: Sat Mar 16 09:00:56 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGG
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Known secondary structure (DSSP)

TTTT
S
TTTSSS

SSS
S












SSTTTT

SS


TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGC
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Known secondary structure (DSSP)
SSS


TTSGGGGG
S
TTSST
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLD
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Known secondary structure (DSSP) SST

BTTT
SS


TT
STT
TT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETD
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Known secondary structure (DSSP) TGGG

TT
TT
S
S
TTTS








SS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence YLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF
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Known secondary structure (DSSP) S
S

S
TTTS





TT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTG
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Known secondary structure (DSSP)



TTS

GGGTSS


TT



TTTT

GGGSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG
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Known secondary structure (DSSP) SSS
TS
SS


GGGGS

T


STT


SS


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence ALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKF
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Known secondary structure (DSSP) TB
TTS
B
TSSS
TTTBTS


B


GGGTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence HQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQK
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Known secondary structure (DSSP)

TTBSTT

TTB
TT



B
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence AICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVE
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Known secondary structure (DSSP) TTS
SSSSSSTT



TT



SSS
SSSS

 .........710...
Sequence FAPAFFKVSDPTK
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Known secondary structure (DSSP)

TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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