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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6i3gA_

Fold library idPDB HeaderMoleculeTitle
c6i3gA_2.00PDB header: peptide binding proteinChain: A: PDB Molecule: abc transporter, substrate-binding protein, family 5;


Added to library: Sat Apr 13 08:59:02 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGLEVLFQGPAGAFANVKEDSLASNIVYAPLYTYEKGNLVNYLAEKVDFKDSKELTIKLKSNLKWHDGKP
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Known secondary structure (DSSP)



S
TTSSSSGGGSS

STTSSTTT
SS
B
TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence ITAEDVLFTFNTVLDEKQNSPSRQYLLVGEKPVKVEKIDDLTVKITLPTASESFLYGISKISPIPKHVFE
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Known secondary structure (DSSP)


GGG

GGGGGGTT
TT
SS

GGGT




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GESNIAKSEKNNNPVGSGAFKFKEWKKGESIVFEKNADYFGGEPKADSIALKIIPNEASQEAALNNGEIS
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Known secondary structure (DSSP) T
S
STT
GGGSS



SSTTT
TT
SSS

SSS


STS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMKTSAEGYEKAKSNSNLQTYTYSEERLNYIVFNQNISNMANKEVRQALSYALNRNEMIESAYGKEGSVP
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Known secondary structure (DSSP)

T
SS
TTSTTTT


GGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence AKSILVPEADFYTEEGVEGYDQDTNKAKDLLDKSGVKIDKLKIGYNTGRFGHKNYALVAQQELKKIGIEA
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Known secondary structure (DSSP)

SSS
TTSTT


TT






T



STTSTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EIVPYESKAFFNILFSNSTECDMYVNGYAWGLEPNPYRGMFETGQYCNQTKYSNAEIDALWEKGFTELNK
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Known secondary structure (DSSP)
TS


S
S


SSSGGGGGGTSTT
GGGTT






 .........430.........440.........450.........460.........470.........
Sequence EKREEIYKQIQQDISKDAPIYTIDYEQNLMAAQKNLKGIKDAKPSPAILFEDWSKLYVE
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Known secondary structure (DSSP)
STT

TTTS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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