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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6i1dA_

Fold library idPDB HeaderMoleculeTitle
c6i1dA_2.28PDB header: gene regulationChain: A: PDB Molecule: endoribonuclease ysh1;


Added to library: Sat Feb 16 08:35:01 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NTTTFKFFSLGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFDLSKVDILLISHFHLDHA
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Known secondary structure (DSSP)


SSSSSS
TT




TT

GGGGS

GGGS
GGG






 .........80.........90.........100.........110.........120.........130.........140
Sequence ASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGGLFSDEDLVDSFDKIETVDYHSTVDVNGIK
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Known secondary structure (DSSP) TTSS

ST





SSTTTT

BT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREVDRHLNSAEVPPLSSNVLIVESTFGTATHEPRLNRER
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Known secondary structure (DSSP)

SSTT
TT

S


S

SSS





SS

S
TTTT




 .........220.........230.........240.........250.........260.........270.........280
Sequence KLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELGGGQVPIFYASNLAKKCMSVFQTYVN
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Known secondary structure (DSSP) TT



SSSST
TTSS

TTTT
GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence MMNDDIRKKFRDSQTNPFIFKNISYLRNLEDFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLIT
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Known secondary structure (DSSP) GS
SSS
TTS
SSS
STT



S

S
TT
SSTTSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence GYSIEGTMAKFIMLEPDTIPSINNPEITIPRRCQVEEISFAAHVDFQENLEFIEKISAPNIILVHGEANP
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Known secondary structure (DSSP) S


TTSTT

S
SS
TTS

S


S





SSS
 .........430.........440.........450........
Sequence MGRLKSALLSNFASLKGTDNEVHVFNPRNCVEVDLEFQ
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Known secondary structure (DSSP) T
TTTTSTT




TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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