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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6hvgA_

Fold library idPDB HeaderMoleculeTitle
c6hvgA_2.80PDB header: transferaseChain: A: PDB Molecule: alternansucrase;


Added to library: Sat Mar 2 08:30:12 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNLSDPITGGHYENHNGYFVYIDASGKQVTGLQNIDGNLQYFDDNGYQVKGSFRDVNGKHIYFDSVTGKA
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Known secondary structure (DSSP)

SS

B
S

TTB
SSS
B

TT
TTS
B

SSTTB
SSS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SSNVDIVNGKAQGYDAQGNQLKKSYVADSSGQTYYFDGNGQPLIGLQTIDGNLQYFNQQGVQIKGGFQDV
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Known secondary structure (DSSP)

TT
TT

B

S
TTS

TTS
B

SSTT
B
TTS
B

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence NNKRIYFAPNTGNAVANTEIINGKLQGRDANGNQVKNAFSKDVAGNTFYFDANGVMLTGLQTISGKTYYL
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Known secondary structure (DSSP) SSS

SSS


TT
TTS
B

S
TTS

TTS
B

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DEQGHLRKNYAGTFNNQFMYFDADTGAGKTAIEYQFDQGLVSQSNENTPHNAAKSYDKSSFENVDGYLTA
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Known secondary structure (DSSP)
TT

B

SSSSS
TTT


S
S




B



TTSBS
SSTTTB

BTTB
BT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DTWYRPTDILKNGDTWTASTETDMRPLLMTWWPDKQTQANYLNFMSSKGLGITTTYTAATSQKTLNDAAF
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Known secondary structure (DSSP) T

BSTTT

TT

GGGT

SSTTTTSS




TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VIQTAIEQQISLKKSTEWLRDAIDSFVKTQANWNKQTEDEAFDGLQWLQGGFLAYQDDSHRTPNTDSGNN
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Known secondary structure (DSSP) T
SSGGGSGGGTT


STTS



TTT
GGG

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RKLGRQPINIDGSKDTTDGKGSEFLLANDIDNSNPIVQAEQLNWLHYLMNFGSITGNNDNANFDGIRVDA
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Known secondary structure (DSSP)





GGGTTSTTTTSTTS




SS
TTSTS
TTS


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence VDNVDADLLKIAGDYFKALYGTDKSDANANKHLSILEDWNGKDPQYVNQQGNAQLTMDYTVTSQFGNSLT
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Known secondary structure (DSSP) GGGS
T
TTT
TT




STTTT
SSB
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence HGANNRSNMWYFLDTGYYLNGDLNKKIVDKNRPNSGTLVNRIANSGDTKVIPNYSFVRAHDYDAQDPIRK
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Known secondary structure (DSSP) S
SS



GGGGT
GGGBGGG
TTT

B
S

SS
S
SS

S
S
S




S
BTTBSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence AMIDHGIIKNMQDTFTFDQLAQGMEFYYKDQENPSGFKKYNDYNLPSAYAMLLTNKDTVPRVYYGDMYLE
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Known secondary structure (DSSP) TTS
SSTTS


T
TT


SSS
S
TT
SS
B
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence GGQYMEKGTIYNPVISALLKARIKYVSGGQTMATDSSGKDLKDGETDLLTSVRFGKGIMTSDQTTTQDNS
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Known secondary structure (DSSP) SBSTTSSB
TT

S
S
SSSS

TT





TT

SSS

S
SS

 .........780.........790.........800.........810.........820.........830.........840
Sequence QDYKNQGIGVIVGNNPDLKLNNDKTITLHMGKAHKNQLYRALVLSNDSGIDVYDSDDKAPTLRTNDNGDL
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Known secondary structure (DSSP)
GGGG

S
TT
B

SS


TTSTT

SS


SGGGS

TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence IFHKTNTFVKQDGTIINYEMKGSLNALISGYLGVWVPVGASDSQDARTVATESSSSNDGSVFHSNAALDS
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Known secondary structure (DSSP) SSSS

B
TTS


TT








S



S

S


ST
 .........920.........930.........940.........950.........960.........970.........980
Sequence NVIYEGFSNFQAMPTSPEQSTNVVIATKANLFKELGITSFELAPQYRSSGDTNYGGMSFLDSFLNNGYAF
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Known secondary structure (DSSP)




TTB


SSGGGSTTT





S
TT

SSS


TT
SSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence TDRYDLGFNKADGNPNPTKYGTDQDLRNAIEALHKNGMQAIADWVPDQIYALPGKEVVTATRVDERGNQL
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Known secondary structure (DSSP) TT
SS


TTS




SS

TT


S




TTS
B
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence KDTDFVNLLYVANTKSSGVDYQAKYGGEFLDKLREEYPSLFKQNQVSTGQPIDASTKIKQWSAKYMNGTN
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Known secondary structure (DSSP) TT
S
SS

SSSTTTT
SB
TTTSSB


SS

SS

GGG
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ILHRGAYYVLKDWATNQYFNIAKTNEVFLPLQLQNKDAQTGFISDASGVKYYSISGYQAKDTFIEDGNGN
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Known secondary structure (DSSP)

SS
TTSB
B
TTT

B
B
SSGGG
B

GGGGT



SS

TTS
B

S
TTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence WYYFDKDGYMVRSQQGENPIRTVETSVNTRNGNYYFMPNGVELRKGFGTDNSGNVYYFDDQGKMVRDKYI
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Known secondary structure (DSSP)
TTS
B



TTS



SSGGG
B
TT

B

S
TTS

TTS
B

S
 .........1270........
Sequence NDDANNFYHLNVDGTMSR
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Known secondary structure (DSSP)
TTS

TTS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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