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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6hq8B_

Fold library idPDB HeaderMoleculeTitle
c6hq8B_2.25PDB header: hydrolaseChain: B: PDB Molecule: beta-1,3-oligosaccharide phosphorylase;


Added to library: Sat Jun 15 08:42:58 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SITMDMVSMNGEMFYKIANNDAMRPFFMTIVSDSNHWMFVSSNGGLTAGRKNAEYALFPYYTDDKITESA
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Known secondary structure (DSSP)


TTTGGGS




SSSTTS
SSGGG



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DITGSKSIFQIQYNNELIVWEPFSERFTNKFKITRNLYKNYYGNKIIFEEINEDLGLTYRYQWCSSNQFG
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Known secondary structure (DSSP) TTSTT
TT
SSSTTSS
TTSS
TTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FVRKSELSNHSKNVYEISLLDGIQNIMPYGVSSDLQSSTSNLVDAYKRSELHPKSGLGIFALSAIIVDKA
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Known secondary structure (DSSP)
SSS


TT


TTTTTTSS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EPSEALKANIAWSLGLNNPKYLVSSLQLNHFRNGKSISPEDDIKGEKGAYFLNTVMTLEANTQKEWMIIA
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Known secondary structure (DSSP) S





S
SS
STTTT





SSS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NVNQDHSDIIAITETIQNNKKIAEDINTDIELGTKRLIELNASSDALQLTADNLRDTRHFSNTLFNIMRG
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Known secondary structure (DSSP)

TTTTT


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence GIFDNNYQIEKGDFSNYIKKANKLVFDKIDLNALGEIFSLNDLNEFASKQKDVDFDRLALEYLPLKFSRR
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Known secondary structure (DSSP)
SSTT
S

TTS
S




S


 .........430.........440.........450.........460.........470.........480.........490
Sequence HGDPSRPWNKFSINTQSEIDGSKVLDYEGNWRDIFQNWEALAHSFPNFIDSMIHKFLNASTFDGYNPYRV
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Known secondary structure (DSSP)

BTTBTTS





B
TTTS
B



SGGGTS
TTS


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TKEGFDWETIEEDDPWSYIGYWGDHQIIYLLKFLEFIEKHQPGKLHSYFESECFVYAAVPYTIKPYEEIL
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Known secondary structure (DSSP) SS





TT
TT



B
TTSSSTTTTGGGTT


B

B




 .........570.........580.........590.........600.........610.........620.........630
Sequence NNPKDTIGYNHEWEKVINERKKSIGADGALLKSNDKSIYHVNFIEKILATVLAKMSNFIPEAGIWLNTQR
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Known secondary structure (DSSP)
TTS

T
GGGGB
B
SSSSB

B
TTTTT

SBS
 .........640.........650.........660.........670.........680.........690.........700
Sequence PEWNDANNALVGNGVSMVTLYYLRRFLKFFDQLLENSTLENIKISNEMVEFYHKVRETLMENQHLLAGSI
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Known secondary structure (DSSP)

S
GGGGGGTTT



GGGGGS

 .........710.........720.........730.........740.........750.........760.........770
Sequence SDTDRKVILDKLGNAAADYRFQIYNSGFWGKKRTHSMQGLKNFTKVSLQFIDHSIKANQRPDKLYHAYNL
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Known secondary structure (DSSP)



S
TTB
TTS
B

 .........780.........790.........800.........810.........820.........830.........840
Sequence MSVEKNKEIAISYLSEMLEGQVAVLSSGFLSSKENLAVLDGLKNSALFREDQYSYLLYPNKELPKFLDKN
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Known secondary structure (DSSP) TTT



SS
S
STTTTTT
SS






GGGSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence TISKEAVSKSELLSLLVSKSNKQVIEKDSIGEYHFNGEFNNASNLKQALEDLSQQNEYKDLVAKESKTVE
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Known secondary structure (DSSP)
B
T
TT

SS
TTS

TT
SSTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence AIFEDVFNHKAFTGRSGTFYGYEGLGSIYWHMVSKLQLAVLECCLKAVEEKESEEVIGRLLEHYYEINEG
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Known secondary structure (DSSP)
GGG


GGGG
SSTTSTT
TT

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IGVHKSPSLYGAFPTDAYSHTPAGKGAQQPGMTGQVKEDILSRFGELGIFVKNGCLELNPCLLRKDEFLK
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Known secondary structure (DSSP)
TTS
SS
TTS

TTSS
S

TTTT

SS

GGGS
S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EAKTFDYVTVNFQHQSLELVEKSLAFTYCQIPIIYKIANQKCIEVFTNDGKSAKAASLILDKQTSQDVFG
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Known secondary structure (DSSP) S

TT


TTTTSS
TTS
S
SB

T
 .........1130........
Sequence RTGIINKIEVSILESDLR
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Known secondary structure (DSSP) T
S
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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