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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6hoxA_

Fold library idPDB HeaderMoleculeTitle
c6hoxA_1.95PDB header: toxinChain: A: PDB Molecule: binding domain (hc) of paraclostridial mosquitocidal


Added to library: Sat Jul 13 08:59:48 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLKDNLVFSLGVESDKIKDLSGNNTNLEVKTGVQIVDGRDSKTIRLNSNENSSIIVQKNESINFSYFSDF
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Known secondary structure (DSSP)
GGGGTTTTSS



TT

SSSSSTT




SSS


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence TISFWIRVPRLNKNDFIDLGIEYDLVNNMDNQGWKISLKDGNLVWRMKDRFGKIIDIITSLTFSNSFIDK
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Known secondary structure (DSSP) B



GGGGGGTT

SSSTT
TT





TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YISSNIWRHITITVNQLKDCTLYINGDKIDSKSINELRGIDNNSPIIFKLEGNRNKNQFIRLDQFNIYQR
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Known secondary structure (DSSP)
SBTSS
TTTTT
TT





SS
S
S
TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALNESEVEMLFNSYFNSNILRDFWGEPLEYNKSYYMINQAILGGPLRSTYKSWYGEYYPYISRMRTFNVS
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Known secondary structure (DSSP)


GGG
S
B
B
TTSSB
BTT

TT
TT

TTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence SFILIPYLYHKGSDVEKVKIINKNNVDKYVRKNDVADVKFENYGNLILTLPMYSKIKERYMVLNEGRNGD
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Known secondary structure (DSSP) TT
SS
TTS



TT
SSSB
BTT
TTTSS


TTT

S
B
SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LKLIQLQSNDKYYCQIRIFEMYRNGLLSIADSSGWYLYSSGWYLDNYKTLDLKKHTKTNWYFVSEDEGWK
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Known secondary structure (DSSP)
SS
TT
S
B
TTT




TGGG

T



TT

 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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