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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6hlxA_

Fold library idPDB HeaderMoleculeTitle
c6hlxA_1.65PDB header: transport proteinChain: A: PDB Molecule: agaa;


Added to library: Sat Dec 29 09:00:41 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTLYFGLSGEPSTLDTVVQPGTSGRTVKLAIHRGLVNYGIDGKISPELAESYEVSPDAKEFTFHLRQAKF
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Known secondary structure (DSSP)
SS

S


TT






S
TTS
SS
TTS

S
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence HDGTTVTSADVKASLERILDPKGKASFRNELSSISKIETPDEKTVKLTLSTPSVAMIDYLALPESVIVPA
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Known secondary structure (DSSP) TTS
B


TTS

TTTTTTSS

TTTSGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence AWLAKNADNPNAAPVGAGPFKFAGWTRGREITVKKFDDYYKKGKPDLDEVHYVFYSDENTRVNALKSGDV
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Known secondary structure (DSSP) TTT
TT




SSSTTT
TT
SSTT



S

STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIIDYVPAKDAADIAKGPETQLLRNTGPFMGLQFNTKFEPFSKPEVRQAIAYAVDRSAIINTAFNGLGSP
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Known secondary structure (DSSP) SSS

GGG
SS





TTSGGGG
S
STT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IFGIAIPKGYMGYSDAKANYFSHHVEKAKALLAKAGYPNGFEVRLLATSQYSFQQNTAIAIQSELAKIGI
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Known secondary structure (DSSP)
SS



TTSTT

STTTTS



TT
TT


SSSTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KVKLDLPDWASRMAKASTGDYDFTVMGSLGEITDADWLSNYYYGGDKLVRTNNSPYFNDQQINDLLDKGR
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Known secondary structure (DSSP)


T
SS

SSSSTT

SS



SSS
TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence ATVDKAERVKIYDAFVDRALELSPLVYFMWREQNYAVKKGVTGFTNMPGFLTFQSGLSIENTKIEHHHHH
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Known secondary structure (DSSP)



S



TTS



SGGGGGGGGGGGGG

S

S
 .
Sequence H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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