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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6hehA_

Fold library idPDB HeaderMoleculeTitle
c6hehA_2.26PDB header: hydrolaseChain: A: PDB Molecule: ubiquitin carboxyl-terminal hydrolase 28,ubiquitin


Added to library: Sat Mar 30 08:35:53 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PNPNDWRRVDGWPVGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNVLENCRSHTEKRNIMFMQEL
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Known secondary structure (DSSP)

GGGGB

TT





SS
TST



T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QYLFALMMGSNRKFVDPSAALDLLKGAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVKSENPMVQLFY
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Known secondary structure (DSSP)
SBS

TT

SS





TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GTFLTEFCNNETFGQYPLQVNGYRNLDECLEGAMVQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKL
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Known secondary structure (DSSP)


SS
TT
SBT




S

TTT
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence EFPQIIYMDRYMYGSSGSRQVPYRLHAVLVHEGQANAGHYWAYIYNQPRQSWLKYNDISVTESSWEEVER
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Known secondary structure (DSSP) B

S
GGGBTT






S
SSS
TTTTTT

 .........290.........300.........310.........320.........330.........
Sequence DSYGGLRNVSAYCLMYINDKLPYFNMSEVEALSVELKHYIQEDNWRFEQEVEEWEEEQS
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Known secondary structure (DSSP) SS
STTTT
GGG

TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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