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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title | 
|---|---|---|---|
| c6hauA_ | 1.86 | PDB header: rna binding protein | Chain: A: PDB Molecule: mrna export factor icp27 homolog; | 
| Added to library: Sat Nov 24 08:30:38 2018 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | G | P | L | L | K | L | F | D | I | S | I | L | P | K | S | G | E | P | K | L | F | L | P | V | P | S | L | P | C | Q | E | A | E | K | T | N | D | K | Y | V | L | A | M | A | Q | R | A | M | H | D | V | P | I | S | S | K | Q | L | T | A | N | L | L | P | V | K | F | K | P | L | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | G | G | G | S | S | S | S |  |  |  |  |  |  |  |  |  |  | T | S | G | G | G | G |  |  |  | T | T | T |  |  |  |  |  |  |  |  |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | 
| Sequence | L | S | I | V | R | Y | T | P | N | Y | Y | Y | W | V | S | M | R | K | E | T | I | A | S | A | N | L | C | T | V | A | A | F | L | D | E | S | L | C | W | G | Q | Q | Y | L | K | N | D | F | I | F | S | E | N | G | K | D | I | I | L | D | T | S | S | A | L | L | S | Q | L | V | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S | T | T | G | G | G |  |  |  |  |  |  |  |  |  |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | 
| Sequence | H | K | I | K | M | L | P | F | C | H | C | L | M | Q | T | T | P | Q | D | H | I | V | K | Q | V | C | Y | L | I | A | S | N | N | R | I | L | D | A | V | R | Y | L | Q | T | S | V | I | K | S | P | I | V | L | L | L | A | Y | A | V | C | L | P | A | A | I | I | C | T | K | N | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  |  |  |  |  | S | T |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | 
| Sequence | E | T | Q | L | Y | S | H | C | M | R | I | L | K | E | Y | R | P | G | D | V | M | N | I | L | H | E | S | L | T | Q | H | L | N | K | C | P | S | S | T | C | A | Y | T | T | R | A | I | V | G | T | K | A | N | T | T | G | L | F | F | L | P | T | Q | |||||||
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | T |  |  |  | 
| Download: | PDB structure | FASTA sequence | 
| 
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