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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6h7wR_

Fold library idPDB HeaderMoleculeTitle
c6h7wR_11.40PDB header: protein transportChain: R: PDB Molecule: vacuolar protein sorting-associated protein 35;


Added to library: Sat Sep 29 08:34:40 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLLEDALIAVRQQTAMMRKFLDTPGKLMDALKCCSTLVSELRTSSLSPKQYYELYMAVFDALRYLSAHLR
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Known secondary structure (DSSP)
TSSSTT
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence ENHPVNHLADLYELVQYAGNIIPRLYLMITVGTAYMSIDGAPVKELMKDMMDMSRGVQHPVRGLFLRYYL
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Known secondary structure (DSSP) GGG


TTGGGSSS
STTTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGQARDYLPTGDSDGPEGNLQDSINFILTNFVEMNKLWVRLQHQGHSRERDLRTQERRELQLLVGSNIVR
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Known secondary structure (DSSP) TTTS
SSTTTT

SS
T
S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSQLVDLPTYRDSILGPLLEQIVQCRDILAQEYLLEVITQVFPDEYHLHTLDQFLGAVSRLNPHVNVKAI
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Known secondary structure (DSSP) TS

T

S
TSTS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIGMMNRLSDYAERVPLYDIFFDQVQHLVQAQHLPIQDTIALCCSLANLSLNIYPERLDYVDGILAYALA
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Known secondary structure (DSSP) T


S


SS

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KVKEHANSADLHSQPAQQSLLSLLQSPLRRYVSIFTALSLPTYVSLFQAQTYPTRRAIAGEIVRTLLKNQ
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Known secondary structure (DSSP)
SSS

SSS
S
T

GGGGS


 .........430.........440.........450.........460.........470.........480.........490
Sequence TLISTPAHLENVLEILKVLIKEGSQMEEQGWLARLVHLIHSDDNDTQFRLLQMTRKAYAEGNERIRTTTP
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Known secondary structure (DSSP)
S


SSS


TTTTS
TTS
SSSGGGTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PLITAGLKLARRFKAREHYDDNWSSQSSSLFKFLHSAISTLYTRVNGPGVADLCLRLFCSCGQVADMTEF
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Known secondary structure (DSSP) TT
SS

TS


SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence EEVAYEFFAQAFTVYEESISDSKAQFQAVCVIASALHRTRNFGRENYDTLITKCAQHASKLLRKPDQCRA
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Known secondary structure (DSSP) GGGT


TT


S
TT


 .........640.........650.........660.........670.........680.........690.........700
Sequence VYLASHLWWATPIAARGETEDTELYRDGKRVLECLQRALRVADSCMETATSIELFVEILDRYVYYFDQRN
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Known secondary structure (DSSP) GGGGS
SS
TTS

TTTTSS



ST


TTT
 .........710.........720.........730.........740....
Sequence ESVTTKYLNGLIELIHSNLAGNQQDSASVEASRKHFIQTLEMIQ
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Known secondary structure (DSSP)
S

TS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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