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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6h3gC_

Fold library idPDB HeaderMoleculeTitle
c6h3gC_2.60PDB header: oxidoreductaseChain: C: PDB Molecule: alcohol oxidase;


Added to library: Sat Oct 13 08:52:17 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PEEVDVIVCGGGPAGCVVAGRLAYADPTLKVMLIEGGANNRDDPWVYRPGIYVRNMQRNGINDKATFYTD
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Known secondary structure (DSSP)

S
S
TT

SSB

TT

GGGGGGGG

SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TMASSYLRGRRSIVPCANILGGGSSINFQMYTRASASDWDDFKTEGWTCKDLLPLMKRLENYQKPCNNDT
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Known secondary structure (DSSP) SS

TTTTT



BTTTS

B




TT

TT
S
S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HGYDGPIAISNGGQIMPVAQDFLRAAHAIGVPYSDDIQDLTTAHGAEIWAKYINRHTGRRSDAATAYVHS
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Known secondary structure (DSSP) S
BSSSB

S


T

B
S
S
SSS
SS

BSB
TTT

B

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VMDVQDNLFLRCNARVSRVLFDDNNKAVGVAYVPSRNRTHGGKLHETIVKARKMVVLSSGTLGTPQILER
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Known secondary structure (DSSP) TT
SSS
SSSBSS

SGGG




S
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SGVGNGELLRQLGIKIVSDLPGVGEQYQDHYTTLSIYRVSNESITTDDFLRGVKDVQRELFTEWEVSPEK
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Known secondary structure (DSSP) T
TT


S
TTTT
SBB


TTS

ST

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ARLSSNAIDAGFKIRPTEEELKEMGPEFNELWNRYFKDKPDKPVMFGSIVAGAYADHTLLPPGKYITMFQ
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Known secondary structure (DSSP)
TTSS
S


S
TTT
TT

SSS

S
GGGS
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YLEYPASRGKIHIKSQNPYVEPFFDSGFMNNKADFAPIRWSYKKTREVARRMDAFRGELTSHHPRFHPAS
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Known secondary structure (DSSP) SS
S

B
S
S
TTS



TT
SGGGSTT
GGGS



TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PAACKDIDIETAKQIYPDGLTVGIHMGSWHQPSEPYKHDKVIEDIPYTEEDDKAIDDWVADHVETTWHSL
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Known secondary structure (DSSP) TT


B

STT
S
TT

TT



B




TT









B

S

B
 .........570.........580.........590.........600.........610.........620.........630
Sequence GTCAMKPREQGGVVDKRLNVYGTQNLKCVDLSICPDNLGTNTYSSALLVGEKGADLIAEELGLKIKTPHA
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Known secondary structure (DSSP)
TT

S
GGGT

B
TT
BBTT
BS
SGGG
SS

SS
STT



SS
S
 ......
Sequence PVPHAP
Predicted secondary structure





SS confidence





Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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