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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6h30A_

Fold library idPDB HeaderMoleculeTitle
c6h30A_2.80PDB header: transport proteinChain: A: PDB Molecule: glutamine abc transporter permease and substrate binding


Added to library: Sat Aug 17 09:47:41 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTVKIASDSSYAPFEFQNGQKKWVGIDVDIMQEVAKINDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTI
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Known secondary structure (DSSP)


SSBTTTB
TTS
ST

S
TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDERKETFDFSNPYYTSALTIATTKDSKLSDYSDLKGKAVGAKNGTAAQTWLQENQKKYGYTIKTYSDGV
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Known secondary structure (DSSP)
TTGGGT
S
SB

B
TT



SGGGGTT
TTST

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HMFAALSSGNIAGAMDEVPVISYAMKQGQDLAMNFPSISLPGGYGFAVMKGKNSTLVDGFNKALAEMKSN
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Known secondary structure (DSSP) TTSSST
S
B

S


TT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDYDKILKKYGITATKKATPKKDVYTIASDNSFAPFEFQNDDKQFTGIDVDLLNAIAKNQGFKLKWNFIG
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Known secondary structure (DSSP) STT








SSS

S
BTTTB
TT

ST



 .........290.........300.........310.........320.........330.........340.........350
Sequence FQAAVDSVQSGHADGMMSGMSITDARKQVFDYGSPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAKNGTA
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Known secondary structure (DSSP) TTSSS
SS
B

TTGGGT
S

TT
TT
SSGGGGTT
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SFDYLNAHAKEYGYTVKTFTDATTMYSSLNNGSINALMDDEPVIKYAIKQGQKFATPIKPIPDGQYGFAV
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Known secondary structure (DSSP) T
S
TSSSTT



S



 .........430.........440.........450......
Sequence KKGSNPELIEMFNNGLANLRANGEYDKIIDKYLESD
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Known secondary structure (DSSP) TTS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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