PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6h02A_

Fold library id	PDB Header	Molecule	Title
c6h02A_	2.80	PDB header: transcription	Chain: A: PDB Molecule: mediator of rna polymerase ii transcription subunit 23;

Links to external resources
Added to library: Sat Sep 1 09:06:34 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E T Q L Q S I F E E V V K T E V I E E A F P G M F M D T P E D E K T K L I S C L G A F R Q F W G G L S Q E S H E Q C I Q W I V K F I H G Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S S
S S S T T S
T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H S P K R I S F L Y D C L A M A V E T G L L P P R L V C E S L I N S D T L E W E R T Q L W A L T F K L V R K I I G G V D Y K G V R D L L K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S
T T
T T S G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I L E K I L T I P N T V S S A V V Q Q L L A A R E V I A Y I L E R N A C L L P A Y F A V T E I R K L Y P E G K L P H W L L G N L V S D F V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S T T T T
T T T T S S
S
T T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T F R P T A R I N S I C G R C S L L P V V N N S G A I C N S W K L D P A T L R F P L K G L L P Y D K D L F E P Q T A L L R Y V L E Q P Y S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T G G G
S S
G G G
T T T
S S S
G G G G S
T S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D M V C N M L G L N K Q H K Q R C P V L E D Q L V D L V V Y A M E R S E T E E K F D D G G T S Q L L W Q H L S S Q L I F F V L F Q F A S F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S
S S
S S
S S T T T S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence H M V L S L H Q K L A G R G L I K G R D H L M W V L L Q F I S G S I Q K N A L A D F L P V M K L F D L L Y P E K E Y I P V P D I N K P Q S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S
T T T S
G G G T T T S
S S
T T S T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence H A F A M T C I W I H L N R K A Q N D N S K L Q I P I P H S L R L H H E F L Q Q S L R N K S L Q M N D Y K I A L L C N A Y S T N S E C F T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S S
S T T T
S
S S S S S T T
T T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence P M G A L V E T I Y G N G I M R I P L P G T N C M A S G S I T P L P M N L L D S L T V H A K M S L I H S I A T R V I K L A H A K S S V A L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S
S
T T S
T T
S B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence P A L V E T Y S R L L V Y M E I E S L G I K G F I S Q L L P T V F K S H A W G I L H T L L E M F S Y R M H H I Q P H Y R V Q L L S H L H T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T T T T T T T
S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence A A V A Q T N Q N Q L H L C V E S T A L R L I T A L G S S E V Q P Q F T R F L S D P K T V L S A E S E E L N R A L I L T L A R A T H V T D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T
T T T G G G S S
G G G G S
S S
T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence F T G S D S I Q G T W C K D I L Q T I M S F T P H N W A S H T L S C F P G P L Q A F F K Q N N V P Q E S R F N L K K N V E E E Y R K W K S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T S T T T S
T T S
S S
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence S N E N D I I T H F S M Q G S P P L F L C L L W K M L L E T D H I N Q I G Y R V L E R I G A R A L V A H V R T F A D F L V Y E F S T S A G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S
T S S
S
S T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence Q Q L N K C I E I L N D M V W K Y N I V T L D R L I L C L A M R S H E G N E A Q V C Y F I I Q L L L L K P N D F R N R V S D F V K E N S P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
T
S S S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence H W L Q N D W H T K H M N Y H K K Y P E K L Y F E G L A E Q V D P P V Q I Q S P Y L P I Y F G N V C L R F L P V F D I V I H R F L E L L P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
S
S S
S S S S
S S
S G G G

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence S K S L E T L L D H L G G L Y K F H D R P V T Y L Y N T L H Y Y E M H L R D R A F L K R K L V H A I I G S L K D N R P Q G W C L S D T Y L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G G G
S
T T T
T T T T T S
T T S S S
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence C A M N A R E E N P W V P D D T Y Y C R L I G R L V D T M A G K S P G P F P N C D W R F N E F P N P A A H A L H V T C V E L M A L A V S G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S S
S S
G G G S S S S S S S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence E V G N A L L N V V L K S Q P L V P R E N I T A W M N A I G L I I T A L P E P Y W I V L H D R I V S V I S S P S L T S E T E W V G Y P F R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T T
S
T T S
S S
G G G

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F D F T A C H Q S Y S E M S C S Y T L A L A H A V W H H S S I G Q L S L I P K F L T E V L L P I V K T E F Q L L Y V Y H L V G P F L Q R F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
S S S
T T T T T T T
S G G G

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence Q E R T R C M I E I G V A F Y D M L L N V D Q C S T H L N Y M D P I C D F L Y H M K Y M F T G D S V K E Q V E K I I C N L K P A L K L R L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T T T S S S T T S
G G

. . . .

Sequence F I T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	T	Q	L	Q	S	I	F	E	E	V	V	K	T	E	V	I	E	E	A	F	P	G	M	F	M	D	T	P	E	D	E	K	T	K	L	I	S	C	L	G	A	F	R	Q	F	W	G	G	L	S	Q	E	S	H	E	Q	C	I	Q	W	I	V	K	F	I	H	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S		S	S	S		S	S			S	S	S							T									T	S		T	T	S														T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	S	P	K	R	I	S	F	L	Y	D	C	L	A	M	A	V	E	T	G	L	L	P	P	R	L	V	C	E	S	L	I	N	S	D	T	L	E	W	E	R	T	Q	L	W	A	L	T	F	K	L	V	R	K	I	I	G	G	V	D	Y	K	G	V	R	D	L	L	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	T	S	S													T	T			T	T	S															G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	L	E	K	I	L	T	I	P	N	T	V	S	S	A	V	V	Q	Q	L	L	A	A	R	E	V	I	A	Y	I	L	E	R	N	A	C	L	L	P	A	Y	F	A	V	T	E	I	R	K	L	Y	P	E	G	K	L	P	H	W	L	L	G	N	L	V	S	D	F	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		S				S	T	T					T										T		T	T	T	T	S	S													S		T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	F	R	P	T	A	R	I	N	S	I	C	G	R	C	S	L	L	P	V	V	N	N	S	G	A	I	C	N	S	W	K	L	D	P	A	T	L	R	F	P	L	K	G	L	L	P	Y	D	K	D	L	F	E	P	Q	T	A	L	L	R	Y	V	L	E	Q	P	Y	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							T	S		T	T	G	G	G								S	S				G	G	G				T	T	T						S	S	S					G	G	G	G	S											T	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	M	V	C	N	M	L	G	L	N	K	Q	H	K	Q	R	C	P	V	L	E	D	Q	L	V	D	L	V	V	Y	A	M	E	R	S	E	T	E	E	K	F	D	D	G	G	T	S	Q	L	L	W	Q	H	L	S	S	Q	L	I	F	F	V	L	F	Q	F	A	S	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S	S		S																							S	S				S	S			S	S	T																	T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	M	V	L	S	L	H	Q	K	L	A	G	R	G	L	I	K	G	R	D	H	L	M	W	V	L	L	Q	F	I	S	G	S	I	Q	K	N	A	L	A	D	F	L	P	V	M	K	L	F	D	L	L	Y	P	E	K	E	Y	I	P	V	P	D	I	N	K	P	Q	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S			S																	T	T	T	S		G	G	G	T	T	T									S			S	S							T	T	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	A	F	A	M	T	C	I	W	I	H	L	N	R	K	A	Q	N	D	N	S	K	L	Q	I	P	I	P	H	S	L	R	L	H	H	E	F	L	Q	Q	S	L	R	N	K	S	L	Q	M	N	D	Y	K	I	A	L	L	C	N	A	Y	S	T	N	S	E	C	F	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T															S	S		S	S							S	T	T												T		S				S	S	S	S									S	T	T		T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	M	G	A	L	V	E	T	I	Y	G	N	G	I	M	R	I	P	L	P	G	T	N	C	M	A	S	G	S	I	T	P	L	P	M	N	L	L	D	S	L	T	V	H	A	K	M	S	L	I	H	S	I	A	T	R	V	I	K	L	A	H	A	K	S	S	V	A	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S						S	S	S	S					S											T	T	S																						T	T			S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	A	L	V	E	T	Y	S	R	L	L	V	Y	M	E	I	E	S	L	G	I	K	G	F	I	S	Q	L	L	P	T	V	F	K	S	H	A	W	G	I	L	H	T	L	L	E	M	F	S	Y	R	M	H	H	I	Q	P	H	Y	R	V	Q	L	L	S	H	L	H	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T		G	G	G	T	T	T	T							T								T	T		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	A	V	A	Q	T	N	Q	N	Q	L	H	L	C	V	E	S	T	A	L	R	L	I	T	A	L	G	S	S	E	V	Q	P	Q	F	T	R	F	L	S	D	P	K	T	V	L	S	A	E	S	E	E	L	N	R	A	L	I	L	T	L	A	R	A	T	H	V	T	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T																				T			T	T	T						G	G	G	S	S		G	G	G	G	S		S	S																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	T	G	S	D	S	I	Q	G	T	W	C	K	D	I	L	Q	T	I	M	S	F	T	P	H	N	W	A	S	H	T	L	S	C	F	P	G	P	L	Q	A	F	F	K	Q	N	N	V	P	Q	E	S	R	F	N	L	K	K	N	V	E	E	E	Y	R	K	W	K	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T					T	T	S	T										T	T	S										T	T	S										S	S																						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	N	E	N	D	I	I	T	H	F	S	M	Q	G	S	P	P	L	F	L	C	L	L	W	K	M	L	L	E	T	D	H	I	N	Q	I	G	Y	R	V	L	E	R	I	G	A	R	A	L	V	A	H	V	R	T	F	A	D	F	L	V	Y	E	F	S	T	S	A	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		T	T	S															T	S	S																																		S			S	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	Q	L	N	K	C	I	E	I	L	N	D	M	V	W	K	Y	N	I	V	T	L	D	R	L	I	L	C	L	A	M	R	S	H	E	G	N	E	A	Q	V	C	Y	F	I	I	Q	L	L	L	L	K	P	N	D	F	R	N	R	V	S	D	F	V	K	E	N	S	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S		S	S											T																					S	S	S															S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	H	W	L	Q	N	D	W	H	T	K	H	M	N	Y	H	K	K	Y	P	E	K	L	Y	F	E	G	L	A	E	Q	V	D	P	P	V	Q	I	Q	S	P	Y	L	P	I	Y	F	G	N	V	C	L	R	F	L	P	V	F	D	I	V	I	H	R	F	L	E	L	L	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		S													S				S	S							S	S	S	S												S	S																					S	G	G	G
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	S	K	S	L	E	T	L	L	D	H	L	G	G	L	Y	K	F	H	D	R	P	V	T	Y	L	Y	N	T	L	H	Y	Y	E	M	H	L	R	D	R	A	F	L	K	R	K	L	V	H	A	I	I	G	S	L	K	D	N	R	P	Q	G	W	C	L	S	D	T	Y	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G	G	G	G		S													T					T	T															T	T	T	T	T	S		T	T	S	S	S		T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	C	A	M	N	A	R	E	E	N	P	W	V	P	D	D	T	Y	Y	C	R	L	I	G	R	L	V	D	T	M	A	G	K	S	P	G	P	F	P	N	C	D	W	R	F	N	E	F	P	N	P	A	A	H	A	L	H	V	T	C	V	E	L	M	A	L	A	V	S	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S	S																									S	S		S	S					G	G	G	S	S	S	S	S																S	S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	E	V	G	N	A	L	L	N	V	V	L	K	S	Q	P	L	V	P	R	E	N	I	T	A	W	M	N	A	I	G	L	I	I	T	A	L	P	E	P	Y	W	I	V	L	H	D	R	I	V	S	V	I	S	S	P	S	L	T	S	E	T	E	W	V	G	Y	P	F	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S	S	S		T	T																S						T											T	S										S	S			G	G	G
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	D	F	T	A	C	H	Q	S	Y	S	E	M	S	C	S	Y	T	L	A	L	A	H	A	V	W	H	H	S	S	I	G	Q	L	S	L	I	P	K	F	L	T	E	V	L	L	P	I	V	K	T	E	F	Q	L	L	Y	V	Y	H	L	V	G	P	F	L	Q	R	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T	S			S	S																			S							T	T								T	T	T	T	T			S												G	G	G
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	Q	E	R	T	R	C	M	I	E	I	G	V	A	F	Y	D	M	L	L	N	V	D	Q	C	S	T	H	L	N	Y	M	D	P	I	C	D	F	L	Y	H	M	K	Y	M	F	T	G	D	S	V	K	E	Q	V	E	K	I	I	C	N	L	K	P	A	L	K	L	R	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S			S																T	T	T	T	S	S	S								T	T	S								G	G
	.	.	.	.
Sequence	F	I	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T