PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6gyhA_

Fold library id	PDB Header	Molecule	Title
c6gyhA_	2.00	PDB header: proton transport	Chain: A: PDB Molecule: family a g protein-coupled receptor-like protein;

Links to external resources
Added to library: Sat Mar 30 08:23:44 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A V H Q I G E G G L V M Y W V T F G L M A F S A L A F A V M T F T R P L N K R S H G Y I T L A I V T I A A I A Y Y A M A A S G G K A L V S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P D G N L R D I Y Y A R Y I D W F F T T P L L L L D I I L L T G I P I G V T L W I V L A D V A M I M L G L F G A L S T N S Y R W G Y Y G V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C A F F F V V L W G L F F P G A K G A R A R G G Q V P G L Y F G L A G Y L A L L W F G Y P I V W G L A E G S D Y I S V T A E A A S Y A G L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T T T T
S

. . . . . . . . . 220 . . . . .

Sequence I A A K V V F G W A V M L S H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	H	Q	I	G	E	G	G	L	V	M	Y	W	V	T	F	G	L	M	A	F	S	A	L	A	F	A	V	M	T	F	T	R	P	L	N	K	R	S	H	G	Y	I	T	L	A	I	V	T	I	A	A	I	A	Y	Y	A	M	A	A	S	G	G	K	A	L	V	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		S		G	G	G																							T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	D	G	N	L	R	D	I	Y	Y	A	R	Y	I	D	W	F	F	T	T	P	L	L	L	L	D	I	I	L	L	T	G	I	P	I	G	V	T	L	W	I	V	L	A	D	V	A	M	I	M	L	G	L	F	G	A	L	S	T	N	S	Y	R	W	G	Y	Y	G	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																										T	T	T	T																												S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	A	F	F	F	V	V	L	W	G	L	F	F	P	G	A	K	G	A	R	A	R	G	G	Q	V	P	G	L	Y	F	G	L	A	G	Y	L	A	L	L	W	F	G	Y	P	I	V	W	G	L	A	E	G	S	D	Y	I	S	V	T	A	E	A	A	S	Y	A	G	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T											T	T																	T									T	T	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	I	A	A	K	V	V	F	G	W	A	V	M	L	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T