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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gxsB_

Fold library idPDB HeaderMoleculeTitle
c6gxsB_1.80PDB header: sugar binding proteinChain: B: PDB Molecule: cv39l lectin;


Added to library: Sat Dec 7 08:26:08 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSSQFHGLAIGNGNSNYLQVLGLANITDTAYLTDWQDSGGNWHAGFALPVPSDYPKGHFFQLTTGVGNSN
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Known secondary structure (DSSP)




GGG
TTT


TTS




TTSTT


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLQVLGAGEDGNPYLVSWQDGSGKWHGGMPLPKPSGYSGGPLVTGIGNSNYLQVIGARVESSPYLVAWQD
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Known secondary structure (DSSP)
TTS

TTS




TT





GGG
SSBSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence NGGNWHAGMPLPNPSGYAGGFQQLATGNGNDHFLQVVGVGNDGNAYLVTWQNAQGQWSPGFALPKPSGYS
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Known secondary structure (DSSP) TTS




TT

S

GGG
TTS

TT





TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence GTFTQLATGVGNGNFLQVLGIGTDGNAYLVAWQDNGGNWHPGFALPKPSGYNGTFAKLVTGIGNSNYLQV
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Known secondary structure (DSSP) S

GGG
TTS

TTS




TT

S

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGIGSNGVAYLVSWQDSGGNWHGGLTLPQPSGYNGSFSQLAAGNGNSHYLQVVGTDAQGNVYLVSWQDSE
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Known secondary structure (DSSP) TTS

TTS




TT

S

S

GGG

TTS

TT
 .........360...
Sequence GKWHAGFELPRAS
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Known secondary structure (DSSP) S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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