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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gs7A_

Fold library idPDB HeaderMoleculeTitle
c6gs7A_3.30PDB header: membrane proteinChain: A: PDB Molecule: dipeptide and tripeptide permease a;


Added to library: Sat Feb 2 11:27:01 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLG
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Known secondary structure (DSSP)



TT


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYY
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Known secondary structure (DSSP) T
TT
TTSTTS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTII
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Known secondary structure (DSSP) T
SGGGGTT
S
GGGTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence GVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMP
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Known secondary structure (DSSP) S

TSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLI
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Known secondary structure (DSSP) TB
SBSSS
B

GGGGGGTT
S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGY
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Known secondary structure (DSSP) T

TT

B
GGG
STTS
STT
 .........430.........440.........450.........460.........470.
Sequence VAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQ
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Known secondary structure (DSSP) TT

SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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