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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6go1A_

Fold library idPDB HeaderMoleculeTitle
c6go1A_2.59PDB header: hydrolaseChain: A: PDB Molecule: polysaccharide deacetylase-like protein;


Added to library: Sat Apr 13 08:23:06 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQGVITWDPYEYNAQNTTLYTKDLRDSFKEVRYNIWRTADGPESKQTFTSQEKDRDFALPLHLKTFHLKR
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Known secondary structure (DSSP)






TT



SS

STTT
SSS



SSTT
GGGGTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GEFQIETVGIKEDNTETNLVTSKITFQQHVPVLMYHAIEKFPGPSDGDYGLYVPPEQFEKHMQYLKDNGY
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Known secondary structure (DSSP)
SSS



B

S



SSSS
GGG
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TMLTFERWNDINRVNKPIFITMDDGRKNNMNALHILQKLKDDTFQPAATEFLTANEIDKPNRLSTDDIKQ
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Known secondary structure (DSSP)

GGGGGGGGGSSS
BGGG

SS




GGGTTSTTB

 .........220.........230.........240.........250.........260.........270.........280
Sequence MMDSGIFSIQSHTANHTMMAHSNNYDEELRGSKEKIEALTGKKVIALAYPVGSYNDPAVEETKKYYEFAV
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Known secondary structure (DSSP) TT


SS


GGG


TSS



GGG


TTT
S
 .........290.........300.........310........
Sequence TTDHGNHITKGMPNEQYLIKRHFVGPNTSMEKFISLIK
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Known secondary structure (DSSP)



S
B




TTGGGSB



TT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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