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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gngB_

Fold library idPDB HeaderMoleculeTitle
c6gngB_2.95PDB header: transferaseChain: B: PDB Molecule: granule-bound starch synthase;


Added to library: Sat Jul 28 09:04:17 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKKLTIVFVGSECTPWSKTGGLGDVMRDLPVNLAQRGHRVMSIQPRYDQYFDAWDTAVRSSIKVNGKLED
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Known secondary structure (DSSP)




S

TTTS
SSTTT


S

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGFFHITSKGVDRIFIDHPWFLAKVWGITGNKLYGAKTGVDYPDNPMRFALMCQAALEAPLRIPLPDPAG
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Known secondary structure (DSSP) TT
TSSSS

TT
SSBSSSS
B
TT
SSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVYGEDVIFVCNDWHSALVPIYLKANYKTRGLYQNAKSIFLLHNIIYQGRFPLEFWPALNLPEAAKKDLV
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Known secondary structure (DSSP)

SSTGGGTTTTTTT
SSS

S
SS





GGGSGGG


STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FESCFAPPPLDGISEQPIISLKPMAMMNFLQAGFIHADRICTVSPQFAAEVASGPRGGVELDKYIRAKGI
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Known secondary structure (DSSP)



TTSS







SS
T
TTTTTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TGIMNGMDIEMWDASKDKFLVTKYTASSVDEGKAANKAVLQAEMGLKVSPTTPLIAFVGRLDDQKGADCM
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Known secondary structure (DSSP)



B
TTTS
TTT
SS
SS


STTT



TTS
S
BSTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VEAMPYLVNTLGAQVVCYGSGREDMAAKFKALEKQFPGMAKGKTAFVPKEEHTLMAGADYVLMPSRFEPC
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Known secondary structure (DSSP) TTTT



B
TSTTT
S


S

S

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GLVQLHAMKYGAVPIVSCTGGLKDSVIPECGFTFEEIPSPEYPGMKISPELIAKGTKIIEEGCKEALAGY
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Known secondary structure (DSSP)
ST
SS

TTT






S
SS
S


TTGGGTTTT
 .........500.........510.........520......
Sequence GSKAFAGMRAACMKQDFAWKKRVLVYEKVFYETLGI
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Known secondary structure (DSSP) TSS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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