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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gneB_

Fold library idPDB HeaderMoleculeTitle
c6gneB_2.55PDB header: transferaseChain: B: PDB Molecule: probable starch synthase 4, chloroplastic/amyloplastic;


Added to library: Sat Jul 28 10:06:49 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGLYVVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDG
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Known secondary structure (DSSP)



S
BTTTB
SSTT


TTS
GGG

SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDW
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Known secondary structure (DSSP) TT

TT
TT
SS
SS

TTTT


STG
 .........150.........160.........170.........180.........190.........200.........210
Sequence QTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVK
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Known secondary structure (DSSP) GGTTTGGGT



S
TT



GGGGGTTT

SSTTTTB
S
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQ
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Known secondary structure (DSSP)
SS
STT
TGGG





TTTS
TTT
TT
SS

BTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFE
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Known secondary structure (DSSP) T



SSS


SGGG
TT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GIEQQFKSHDHVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFD
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Known secondary structure (DSSP) TTT
SS
S


S

S

S

STT
SS

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence IDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGSSATQYEELYTRS
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Known secondary structure (DSSP) TT
TTS
TTT

BSSSS
TS

SS
 ....
Sequence VSRA
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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