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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gn6A_

Fold library idPDB HeaderMoleculeTitle
c6gn6A_2.20PDB header: hydrolaseChain: A: PDB Molecule: alpha-l-fucosidase;


Added to library: Sat Dec 29 08:24:16 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAREQRIQWFNHDRFGMFIHWGLYAIPARGEWVRSFERIPVEDYEKYFNSFNPVNYDPKAWAKAAKAAGM
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Known secondary structure (DSSP)
T


SGGGTTTB
TTTT

T


TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KYAVMTTKHHDGFCLFDSALTDYKATNTPAGRDLIREYADAFRAEGLKVGFYYSIIDWHHPDYPAYGDRQ
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Known secondary structure (DSSP)

TT

BSS

SS
S
BGGGSTT
S
TT
S

SSSTTS

TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HPMRDNAEFKDRPQDFNRYLDYMHGQVKELLTNYGTIDVLWFDFSYEDMTGEKWKATELVKMIRELQPNV
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Known secondary structure (DSSP)
TTTT
GGGTT



TTSSS




BTTBSGGGGT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIDNRLGGNIKAREPEIYAGDFASPEQLLPPHGIVNEDGKPLPWEACITLNHHWGYHAHDRDYKTPKQVV
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Known secondary structure (DSSP)
S
SSS
TTSSS

TTS
SSB

BSS

SS

B
TT

B

BSSS
SS
BTT





 .........290.........300.........310.........320.........330.........340.........350
Sequence RGLVECVSKNGNMLLNVGPNAKGEIPQLSLDVLGEVGAWMRANGDSIYGCGAAALSKPEWGRYTQKGNKL
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Known secondary structure (DSSP) TT



TTS


GGGTTT
B

SS


TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YAHILDRGIGPIALQGLNGRVKEARLLADGAEVNIQTPWNAVDYPDYLFVNIPTAQLPDDFNTVIELTLE
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Known secondary structure (DSSP)



SSST
TTTTTTT


S

GGGTT
TT


SSS
S
SS

 .
Sequence D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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