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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gmmA_

Fold library idPDB HeaderMoleculeTitle
c6gmmA_2.06PDB header: sugar binding proteinChain: A: PDB Molecule: adhesin laba;


Added to library: Sat Dec 21 08:19:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDLSDSYERLNNLLTNYSVLNALIRQSADPNAINNARGNLNASAKNLINDKKNSPAYQAVLLALNAAAGL
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Known secondary structure (DSSP)
TT
T
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WQVMSYAISPCGPGKDTSKNGGVQTFHNTPSNQWGGTTITCGTTGYEPGPYSILSTENYAKINKAYQIIQ
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Known secondary structure (DSSP) GGGB





S
TTSTT
SSS



TT






SS

STTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence KAFGSSGKDIPALSDTNTELKFTINEEIVTKNNAQVLLEQASTIITTLNSACPWINNGGAGGASSGSLWE
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Known secondary structure (DSSP) TTTS

S

TT







S

BBGGGGB
SSTTSBSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIYLKGDGSACGIFKNEISAIQDMIKNAAIAVEQSKIVAANAQNQRNLDTGKTFNPYKDANFAQSMFANA
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Known secondary structure (DSSP) T



S

BTT
S





SSS


TTTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KAQAEILNRAQAVVKDFERIPAEFVKDSLGVCHEVQNGHLRGDNTWGAGCAYVGETVTNLKDSIAHFGDQ
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Known secondary structure (DSSP) TTS
TGGG
TT








SSTTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AERIHNARNLAYTLANFSSQYQKLGEHYDSITAAISSLPDAQSLQNVVSKKTNPNSPQGIQDNYYIDSNI
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Known secondary structure (DSSP) TSTTGGG
TT
TTS


 .........430...
Sequence HSQVQSRSQELKG
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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