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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gezB_

Fold library idPDB HeaderMoleculeTitle
c6gezB_2.47PDB header: fluorescent proteinChain: B: PDB Molecule: green fluorescent protein,optimized ratiometric calcium


Added to library: Sat Aug 24 08:21:40 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLVQCFARYPD
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Known secondary structure (DSSP)


TTSSTTGGGTTTSS
SS
GGGTTTT

GGG
B

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence HMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNAI
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Known secondary structure (DSSP) GGGGG
TTTT
TTS
TTS

TTSTTTTT
B

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence HGNVYITADKQKNGIKANFGLNCNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRD
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Known secondary structure (DSSP) GGGTBTTS
SSSS





S

TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HMVLLEFVTAARMQVADASEEELSECFRIFDFDGNGFIDREEFGDIIRLTGEQLTDEDVDEIFGDSDTDK
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Known secondary structure (DSSP)


GGGS

TT
SSSB
TTS
S



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGRIDFDEFLKMVENVQPIYPELMGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMV
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Known secondary structure (DSSP) SSSB
STTTTTSSSS





S

TT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LLEFVTAAGITLGMDKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKLICTTGKLPVPW
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Known secondary structure (DSSP)
S
S



GGGGGSSTTGGGTTTSS
SS
G
 .........430.........440.........450.........460.........470.........480.........490
Sequence PTLVTTLLMCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDF
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Known secondary structure (DSSP) GGGTTT

GGG
B

GGGGGG
TTTT
TTS
TTS
 .........500.........510.........520.........530..
Sequence KEDGNILGHKLEYNYNSHFVYITADKQKNGIKANFKIRHNIE
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Known secondary structure (DSSP)
TTSTTTTT
B
S



GGGTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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