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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gdrA_

Fold library idPDB HeaderMoleculeTitle
c6gdrA_2.33PDB header: ligaseChain: A: PDB Molecule: dna ligase;


Added to library: Sat Jul 28 08:33:36 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IVDGLQLAKQYGHQDINIAEYWVSEKLDGIRARWDGTELRTRNNNKIDAPAWFTANWPKATIDGELWIAR
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Known secondary structure (DSSP)

SS
B

TT




GGG

S
SS

TT

B



TT

SS

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GQFERTASIVLSKLTLPSKRWAKVRFMAFDMPVAGQSFDSRLNMLNNLKEATPNPTFAVVSQFTLSSVNA
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Known secondary structure (DSSP) T
S





GGGGG



SSSBT


TT


B


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LEEKLEQVTLSGGEGLMLHHKKAFYHSGRSDKLIKVKQFEDAEAKVLAHFAGKGKFKGMMGSLLVETPAG
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Known secondary structure (DSSP) TT

TT
B

SB

TT




GGGTTS
TTS
 .........220.........230.........240.........250......
Sequence VQFKLGTGFSEKERRAPPAVGSWVTFKFYGVTKNGKPRFASFLRVR
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SS confidence













































Known secondary structure (DSSP)

SS

SS


TT
S
B
TTS
BSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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