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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gctA_

Fold library idPDB HeaderMoleculeTitle
c6gctA_3.85PDB header: membrane proteinChain: A: PDB Molecule: neutral amino acid transporter b(0);


Added to library: Sat Jun 16 08:28:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSL
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Known secondary structure (DSSP)

TTS
SSSS

TTTGGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAASKEVLDSFLDLARNIFPSNLV
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Known secondary structure (DSSP) S

SSS

TTT
SS
TTT




TT
S
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATM
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Known secondary structure (DSSP) GGGT




SSSS




S

TTTT
GGG
STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFL
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Known secondary structure (DSSP) TTT

STTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence WGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQ
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Known secondary structure (DSSP) GGG

TTTTS


SGGGTTTTTS

TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDAL
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Known secondary structure (DSSP)


STTSS
SSTT
TTT

GGGGTT
 .........430...
Sequence GAGLLQNYVDRTQ
Predicted secondary structure

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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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