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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gcs4_

Fold library idPDB HeaderMoleculeTitle
c6gcs4_4.32PDB header: oxidoreductaseChain: 4: PDB Molecule: nd4 subunit (nu4m);


Added to library: Sat Oct 13 09:00:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLSSLYLFNRILAWQGNVKHFYLFASNLLLLFIVVLYINFNTFSNSFQFNFELFNSLNPFGLSNSDISNG
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Known secondary structure (DSSP)

TTTTTSSTT

TGGGT

STTS

S



S
TTSSS



SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LLFGIDGLSLTFILLTVLLIPLTLLGNWYNINFNSNLYYTLVLAIGLVILLNFWALDYISFYILFEATLP
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Known secondary structure (DSSP) S




STTTTTTSS


TT
ST

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLFILIHIYGSSDSERASFYVLMFTLSGSLFMLLSIVVISIVLNTTNFINHNLFVLSLDLQTIIWLGLFI
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Known secondary structure (DSSP) TT
SS
SS


TTT






TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AIMVKTPLFPIHVWLPVVHSESPLAGSMILAGLILKLALYAILRLLLPLLCEAQILYTPMIYIISLLTII
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Known secondary structure (DSSP) S

SSS
STTS

STTSSSTT
TSSSTT
SS
TTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTSLATLRQIDLKVIIAYSSISHMGIAILGVCSNTSLGIYGSIVLGVAHGFVSPALFLIVGGILYDRYHI
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Known secondary structure (DSSP) TTTT

BTTTT
STTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RIVNYYKGLTTYMPQLATYIIILSFANIGTPLTGNFTGEFLSLQGGFIRNPIIGGISCISVLLAAIYQLK
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Known secondary structure (DSSP)
BSTTT


SSS
T
SSTTTT
TT
 .........430.........440.........450.........460.........470.....
Sequence LTNKLTGGISSIYMHRTNDVTIREKFIMNILIISTLIIGICPQIMYNLLYWTVNN
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Known secondary structure (DSSP) TTTTS
TT

SS




S

SSTTSS


TT

GGGS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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